src/ten/chan.c File Reference

#include "ten.h"
#include "privateTen.h"

Include dependency graph for chan.c:

Defines
#define	DWI_NUM_MAX   256
Functions
int	tenDWMRIKeyValueParse (Nrrd **ngradP, Nrrd **nbmatP, double *bP, unsigned int **skipP, unsigned int *skipNumP, const Nrrd *ndwi)
int	tenBMatrixCalc (Nrrd *nbmat, const Nrrd *_ngrad)
int	tenEMatrixCalc (Nrrd *nemat, const Nrrd *_nbmat, int knownB0)
void	tenEstimateLinearSingle_d (double *ten, double *B0P, const double *dwi, const double *emat, double *vbuf, unsigned int DD, int knownB0, double thresh, double soft, double b)
void	tenEstimateLinearSingle_f (float *_ten, float *_B0P, const float *_dwi, const double *emat, double *vbuf, unsigned int DD, int knownB0, float thresh, float soft, float b)
int	tenEstimateLinear3D (Nrrd *nten, Nrrd **nterrP, Nrrd **nB0P, const Nrrd *const *_ndwi, unsigned int dwiLen, const Nrrd *_nbmat, int knownB0, double thresh, double soft, double b)
int	tenEstimateLinear4D (Nrrd *nten, Nrrd **nterrP, Nrrd **nB0P, const Nrrd *ndwi, const Nrrd *_nbmat, int knownB0, double thresh, double soft, double b)
void	tenSimulateSingle_f (float *dwi, float B0, const float *ten, const double *bmat, unsigned int DD, float b)
int	tenSimulate (Nrrd *ndwi, const Nrrd *nT2, const Nrrd *nten, const Nrrd *_nbmat, double b)
void	tenCalcOneTensor1 (float tens[7], float chan[7], float thresh, float slope, float b)
void	tenCalcOneTensor2 (float tens[7], float chan[7], float thresh, float slope, float b)
int	tenCalcTensor (Nrrd *nout, Nrrd *nin, int version, float thresh, float slope, float b)
Variables
const char *	tenDWMRIModalityKey = "modality"
const char *	tenDWMRIModalityVal = "DWMRI"
const char *	tenDWMRINAVal = "n/a"
const char *	tenDWMRIBValueKey = "DWMRI_b-value"
const char *	tenDWMRIGradKeyFmt = "DWMRI_gradient_%04u"
const char *	tenDWMRIBmatKeyFmt = "DWMRI_B-matrix_%04u"
const char *	tenDWMRINexKeyFmt = "DWMRI_NEX_%04u"
const char *	tenDWMRISkipKeyFmt = "DWMRI_skip_%04u"

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Define Documentation

#define DWI_NUM_MAX   256

---

Function Documentation

int tenBMatrixCalc	(	Nrrd *	nbmat,
		const Nrrd *	_ngrad
	)

void tenCalcOneTensor1	(	float	tens[7],
		float	chan[7],
		float	thresh,
		float	slope,
		float	b
	)

void tenCalcOneTensor2	(	float	tens[7],
		float	chan[7],
		float	thresh,
		float	slope,
		float	b
	)

int tenCalcTensor	(	Nrrd *	nout,
		Nrrd *	nin,
		int	version,
		float	thresh,
		float	slope,
		float	b
	)

int tenDWMRIKeyValueParse	(	Nrrd **	ngradP,
		Nrrd **	nbmatP,
		double *	bP,
		unsigned int **	skipP,
		unsigned int *	skipNumP,
		const Nrrd *	ndwi
	)

int tenEMatrixCalc	(	Nrrd *	nemat,
		const Nrrd *	_nbmat,
		int	knownB0
	)

int tenEstimateLinear3D	(	Nrrd *	nten,
		Nrrd **	nterrP,
		Nrrd **	nB0P,
		const Nrrd *const *	_ndwi,
		unsigned int	dwiLen,
		const Nrrd *	_nbmat,
		int	knownB0,
		double	thresh,
		double	soft,
		double	b
	)

int tenEstimateLinear4D	(	Nrrd *	nten,
		Nrrd **	nterrP,
		Nrrd **	nB0P,
		const Nrrd *	ndwi,
		const Nrrd *	_nbmat,
		int	knownB0,
		double	thresh,
		double	soft,
		double	b
	)

void tenEstimateLinearSingle_d	(	double *	ten,
		double *	B0P,
		const double *	dwi,
		const double *	emat,
		double *	vbuf,
		unsigned int	DD,
		int	knownB0,
		double	thresh,
		double	soft,
		double	b
	)

void tenEstimateLinearSingle_f	(	float *	_ten,
		float *	_B0P,
		const float *	_dwi,
		const double *	emat,
		double *	vbuf,
		unsigned int	DD,
		int	knownB0,
		float	thresh,
		float	soft,
		float	b
	)

int tenSimulate	(	Nrrd *	ndwi,
		const Nrrd *	nT2,
		const Nrrd *	nten,
		const Nrrd *	_nbmat,
		double	b
	)

void tenSimulateSingle_f	(	float *	dwi,
		float	B0,
		const float *	ten,
		const double *	bmat,
		unsigned int	DD,
		float	b
	)

---

Variable Documentation

const char* tenDWMRIBmatKeyFmt = "DWMRI_B-matrix_%04u"

const char* tenDWMRIBValueKey = "DWMRI_b-value"

const char* tenDWMRIGradKeyFmt = "DWMRI_gradient_%04u"

const char* tenDWMRIModalityKey = "modality"

const char* tenDWMRIModalityVal = "DWMRI"

const char* tenDWMRINAVal = "n/a"

const char* tenDWMRINexKeyFmt = "DWMRI_NEX_%04u"

const char* tenDWMRISkipKeyFmt = "DWMRI_skip_%04u"