| CBitString(EAlphabet alpha, int32_t width=1) | CBitString | |
| cleanup() | CBitString | |
| create(uint64_t len) | CBitString | |
| CSGObject() | CSGObject | |
| CSGObject(const CSGObject &orig) | CSGObject | |
| get_io() | CSGObject | |
| get_length() const | CBitString | |
| get_name() const | CBitString | [virtual] |
| get_parallel() | CSGObject | |
| get_version() | CSGObject | |
| io | CSGObject | |
| load_fasta_file(const char *fname, bool ignore_invalid=false) | CBitString | |
| obtain_from_char(char *str, uint64_t len) | CBitString | |
| operator[](uint64_t index) const | CBitString | |
| parallel | CSGObject | |
| set_binary_word(uint16_t word, uint64_t index) | CBitString | |
| set_io(CIO *io) | CSGObject | |
| set_parallel(CParallel *parallel) | CSGObject | |
| set_string(uint64_t *str, uint64_t len) | CBitString | |
| set_version(CVersion *version) | CSGObject | |
| version | CSGObject | |
| ~CBitString() | CBitString | |
| ~CSGObject() | CSGObject | [virtual] |