mvpa2.support.nibabel.afni_suma_spec.SurfaceSpec

class mvpa2.support.nibabel.afni_suma_spec.SurfaceSpec(surfaces, states=None, groups=None, directory=None)

Methods

add_surface(state)
as_string()
find_surface_from_state(surfacestate)
get_surface(*args)	Wizard-like function to get a surface
get_surface_file(*args)	Wizard-like function to get the filename of a surface
same_states(other)	Returns whether another surface has the same surface states
write(fnout[, overwrite])	Writes spec to a file

add_surface(state)

as_string()

find_surface_from_state(surfacestate)

get_surface(*args)

Wizard-like function to get a surface

Parameters:

*args: list of str :

parts of the surface file name or description, such as ‘pial’ (for pial surface), ‘wm’ (for white matter), or ‘lh’ (for left hemisphere’).

Returns:

surf: surf.Surface :

get_surface_file(*args)

Wizard-like function to get the filename of a surface

Parameters:

*args: list of str :

parts of the surface file name or description, such as ‘pial’ (for pial surface), ‘wm’ (for white matter), or ‘lh’ (for left hemisphere’).

Returns:

filename: str :

filename of the surface specified, or None if no unique match was found.

same_states(other)

Returns whether another surface has the same surface states

Parameters:other: SurfaceSpec : Returns:True iff other has the same states :

write(fnout, overwrite=True)

Writes spec to a file

Parameters:

fn: str :

filename where the spec is written to

overwrite: boolean (default: True) :

overwrite the file even if it exists already.