Uses of Class
picard.util.IlluminaUtil.IlluminaAdapterPair

Packages that use IlluminaUtil.IlluminaAdapterPair

Package	Description
picard.illumina
picard.util

Uses of IlluminaUtil.IlluminaAdapterPair in picard.illumina

Fields in picard.illumina with type parameters of type IlluminaUtil.IlluminaAdapterPair

Modifier and Type	Field and Description
List<IlluminaUtil.IlluminaAdapterPair>	MarkIlluminaAdapters.ADAPTERS
List<IlluminaUtil.IlluminaAdapterPair>	IlluminaBasecallsToFastq.ADAPTERS_TO_CHECK
List<IlluminaUtil.IlluminaAdapterPair>	IlluminaBasecallsToSam.ADAPTERS_TO_CHECK

Constructor parameters in picard.illumina with type arguments of type IlluminaUtil.IlluminaAdapterPair

Constructor and Description
ClusterDataToSamConverter(String runBarcode, String readGroupId, ReadStructure readStructure, List<IlluminaUtil.IlluminaAdapterPair> adapters) Constructor

Uses of IlluminaUtil.IlluminaAdapterPair in picard.util

Methods in picard.util that return IlluminaUtil.IlluminaAdapterPair

Modifier and Type	Method and Description
static IlluminaUtil.IlluminaAdapterPair	IlluminaUtil.IlluminaAdapterPair.valueOf(String name) Returns the enum constant of this type with the specified name.
static IlluminaUtil.IlluminaAdapterPair[]	IlluminaUtil.IlluminaAdapterPair.values() Returns an array containing the constants of this enum type, in the order they are declared.