| Package | Description |
|---|---|
| picard.analysis | |
| picard.analysis.directed |
| Class and Description |
|---|
| RnaSeqMetricsCollector.StrandSpecificity |
| Class and Description |
|---|
| CollectHsMetrics
Collects a set of HS metrics from a sam or bam file.
|
| CollectTargetedMetrics
Both CollectTargetedPCRMetrics and CalculateHybridSelection metrics share virtually identical program structures except
for the name of their targeting mechanisms (e.g.
|
| HsMetricCollector
Calculates HS metrics for a given SAM or BAM file.
|
| HsMetrics
Metrics generated by CollectHsMetrics for the analysis of target-capture sequencing experiments.
|
| RnaSeqMetricsCollector.StrandSpecificity |
| TargetedPcrMetrics
Metrics class for targeted pcr runs such as TSCA runs
|
| TargetedPcrMetricsCollector
Calculates HS metrics for a given SAM or BAM file.
|
| TargetMetricsCollector
TargetMetrics, are metrics to measure how well we hit specific targets (or baits) when using a targeted sequencing process like hybrid selection
or Targeted PCR Techniques (TSCA).
|