Uses of Class
edu.isi.pegasus.planner.classes.ADag

Packages that use ADag

Package	Description
edu.isi.pegasus.planner.classes
edu.isi.pegasus.planner.client
edu.isi.pegasus.planner.cluster
edu.isi.pegasus.planner.cluster.aggregator
edu.isi.pegasus.planner.code
edu.isi.pegasus.planner.code.generator
edu.isi.pegasus.planner.code.generator.condor
edu.isi.pegasus.planner.code.gridstart
edu.isi.pegasus.planner.parser.dax
edu.isi.pegasus.planner.parser.pdax
edu.isi.pegasus.planner.refiner
edu.isi.pegasus.planner.refiner.createdir
edu.isi.pegasus.planner.selector	Provides the interface and call-out to the site selector mechanism.
edu.isi.pegasus.planner.selector.site
edu.isi.pegasus.planner.selector.site.heft
edu.isi.pegasus.planner.transfer
edu.isi.pegasus.planner.transfer.mapper
edu.isi.pegasus.planner.transfer.mapper.impl
edu.isi.pegasus.planner.transfer.refiner

Uses of ADag in edu.isi.pegasus.planner.classes

Methods in edu.isi.pegasus.planner.classes with parameters of type ADag

Modifier and Type	Method	Description
private java.lang.String	PlannerCache.getCacheFileName(ADag adag, FileServerType.OPERATION operation)	Constructs the basename to the cache file that is to be used to log the transient files.
void	PlannerCache.initialize(PegasusBag bag, ADag dag)	Initialize the replica catalog instances that make up the cache.
private ReplicaCatalog	PlannerCache.intializeRCAsCache(ADag dag, FileServerType.OPERATION type)	Initializes the transient replica catalog and returns a handle to it.

Uses of ADag in edu.isi.pegasus.planner.client

Methods in edu.isi.pegasus.planner.client that return ADag

Modifier and Type	Method	Description
private ADag	CPlanner.parseDAX(java.lang.String dax)	Parses the DAX and returns the associated ADag object

Methods in edu.isi.pegasus.planner.client with parameters of type ADag

Modifier and Type	Method	Description
protected java.lang.String	CPlanner.determineRelativeSubmitDirectory(ADag dag, java.lang.String dir, java.lang.String user, java.lang.String vogroup, boolean timestampBased)	Creates the submit directory for the workflow.
private java.lang.String	CPlanner.determineRootWorkflowUUID(ADag dag, PlannerOptions options, PegasusProperties properties)	Determines the workflow uuid for a workflow
private void	CPlanner.generateStampedeEventsForAbstractWorkflow(ADag workflow, PegasusBag bag)	Generates events for the abstract workflow.
protected java.lang.String	CPlanner.getDAGFilename(ADag dag, PlannerOptions options)	Returns the basename of the dag file
java.lang.String	CPlanner.getNOOPJobName(ADag dag)	Returns the name of the noop job.
protected java.lang.String	CPlanner.getRandomDirectory(ADag dag)	Sets the basename of the random directory that is created on the remote sites per workflow.
protected boolean	CPlanner.handleRescueDAG(ADag dag, PlannerOptions options)	Checks for rescue dags, and determines whether to plan or not.

Uses of ADag in edu.isi.pegasus.planner.cluster

Fields in edu.isi.pegasus.planner.cluster declared as ADag

Modifier and Type	Field	Description
protected ADag	Abstract.mScheduledDAG	ADag object containing the jobs that have been scheduled by the site selector.
private ADag	Horizontal.mScheduledDAG	ADag object containing the jobs that have been scheduled by the site selector.

Methods in edu.isi.pegasus.planner.cluster that return ADag

Modifier and Type	Method	Description
ADag	Abstract.getClusteredDAG()	Returns the clustered workflow.
ADag	Clusterer.getClusteredDAG()	Returns the clustered workflow.
ADag	Horizontal.getClusteredDAG()	Returns the clustered workflow.
ADag	Horizontal.getWorkflow()	Returns a reference to the workflow that is being refined by the refiner.

Methods in edu.isi.pegasus.planner.cluster with parameters of type ADag

Modifier and Type	Method	Description
void	Abstract.initialize(ADag dag, PegasusBag bag)	Initializes the Clusterer impelementation
void	Clusterer.initialize(ADag dag, PegasusBag bag)	Initializes the Clusterer impelementation
void	Horizontal.initialize(ADag dag, PegasusBag bag)	Initializes the Clusterer impelementation
void	JobAggregator.initialize(ADag dag, PegasusBag bag)	Initializes the JobAggregator impelementation
static Clusterer	ClustererFactory.loadClusterer(ADag dag, PegasusBag bag, java.lang.String type)	Loads the appropriate clusterer on the basis of the clustering type specified in the options passed to the planner.

Uses of ADag in edu.isi.pegasus.planner.cluster.aggregator

Fields in edu.isi.pegasus.planner.cluster.aggregator declared as ADag

Modifier and Type	Field	Description
protected ADag	Abstract.mClusteredADag	The handle to the ADag object that contains the workflow being clustered.
private ADag	JobAggregatorInstanceFactory.mDAG	ADag object containing the jobs that have been scheduled by the site selector.

Methods in edu.isi.pegasus.planner.cluster.aggregator with parameters of type ADag

Modifier and Type	Method	Description
void	Abstract.initialize(ADag dag, PegasusBag bag)	Initializes the JobAggregator impelementation
void	JobAggregatorInstanceFactory.initialize(ADag dag, PegasusBag bag)	Initializes the Factory.
void	MPIExec.initialize(ADag dag, PegasusBag bag)	Initializes the JobAggregator impelementation
void	SeqExec.initialize(ADag dag, PegasusBag bag)	Initializes the JobAggregator impelementation
static JobAggregator	JobAggregatorFactory.loadInstance(ADag dag, PegasusBag bag)	Loads the implementing class corresponding to the mode specified by the user at runtime in the properties file.
static JobAggregator	JobAggregatorFactory.loadInstance(java.lang.String className, ADag dag, PegasusBag bag)	Loads the implementing class corresponding to the class passed.

Uses of ADag in edu.isi.pegasus.planner.code

Fields in edu.isi.pegasus.planner.code declared as ADag

Modifier and Type	Field	Description
private ADag	GridStartFactory.mDAG	The workflow object.

Methods in edu.isi.pegasus.planner.code with parameters of type ADag

Modifier and Type	Method	Description
java.util.Collection<java.io.File>	CodeGenerator.generateCode(ADag dag)	Generates the code for the concrete workflow in the input format of the workflow executor being used.
void	CodeGenerator.generateCode(ADag dag, Job job)	Generates the code for a single job in the input format of the workflow executor being used.
void	GridStart.initialize(PegasusBag bag, ADag dag)	Initializes the GridStart implementation.
void	GridStartFactory.initialize(PegasusBag bag, ADag dag)	Initializes the factory with known GridStart implementations.
private GridStart	GridStartFactory.loadGridStart(PegasusBag bag, ADag dag, java.lang.String className)	Loads the implementing class corresponding to the class.

Uses of ADag in edu.isi.pegasus.planner.code.generator

Methods in edu.isi.pegasus.planner.code.generator with parameters of type ADag

Modifier and Type	Method	Description
java.util.Map<java.lang.String,java.lang.String>	Braindump.defaultBrainDumpEntries(ADag workflow)	Returns default braindump entries.
java.util.Collection<java.io.File>	Braindump.generateCode(ADag dag)	Generates the code for the executable workflow in terms of a braindump file that contains workflow metadata useful for monitoring daemons etc.
void	Braindump.generateCode(ADag dag, Job job)	Method not implemented.
java.util.Collection<java.io.File>	Braindump.generateCode(ADag dag, java.util.Map<java.lang.String,java.lang.String> additionalEntries)	Generates the code for the executable workflow in terms of a braindump file that contains workflow metadata useful for monitoring daemons etc.
java.util.Collection<java.io.File>	DAXReplicaStore.generateCode(ADag dag)	Generates the notifications input file.
void	DAXReplicaStore.generateCode(ADag dag, Job job)	Not implemented
java.util.Collection<java.io.File>	MonitordNotify.generateCode(ADag dag)	Generates the notifications input file.
void	MonitordNotify.generateCode(ADag dag, Job job)	Not implemented
java.util.Collection<java.io.File>	PBS.generateCode(ADag dag)	Generates the code for the concrete workflow in the GRMS input format.
void	PBS.generateCode(ADag dag, Job job)	Generates the code for a single job in the input format of the workflow executor being used.
java.util.Collection<java.io.File>	PMC.generateCode(ADag dag)	Generates the code for the concrete workflow in the GRMS input format.
void	PMC.generateCode(ADag dag, Job job)	Generates the code for a single job in the input format of the workflow executor being used.
java.util.Collection<java.io.File>	Shell.generateCode(ADag dag)	Generates the code for the concrete workflow in the GRMS input format.
void	Shell.generateCode(ADag dag, Job job)	Generates the code for a single job in the input format of the workflow executor being used.
java.util.Collection<java.io.File>	Stampede.generateCode(ADag dag)	Generates the code for the executable workflow in terms of a braindump file that contains workflow metadata useful for monitoring daemons etc.
void	Stampede.generateCode(ADag dag, Job job)	Method not implemented.
java.util.Collection<java.io.File>	Stork.generateCode(ADag dag)	Generates the code for the concrete workflow in the input format of the workflow executor being used.
void	Stork.generateCode(ADag dag, Job job)	Generates the code for a single job in the Stork format.
protected void	Stampede.generateEventsForDAXTask(java.io.PrintWriter writer, ADag workflow, Job job)	Generates stampede events corresponding to jobs/tasks in the DAX
protected void	Stampede.generateEventsForExecutableJob(java.io.PrintWriter writer, ADag dag, Job job)	Generates stampede events corresponding to an executable job
protected void	Stampede.generateTaskMapEvents(java.io.PrintWriter writer, ADag dag, Job job)	Generates the task.map events that link the jobs in the DAX with the jobs in the executable workflow
abstract java.util.Map<java.lang.String,java.lang.String>	Abstract.getAdditionalBraindumpEntries(ADag workflow)	Returns a Map containing additional metrics entries that are specific to a Code Generator
java.util.Map<java.lang.String,java.lang.String>	PBS.getAdditionalBraindumpEntries(ADag workflow)	Returns a Map containing additional braindump entries that are specific to a Code Generator
java.util.Map<java.lang.String,java.lang.String>	PMC.getAdditionalBraindumpEntries(ADag workflow)	Returns a Map containing additional braindump entries that are specific to a Code Generator.
java.util.Map<java.lang.String,java.lang.String>	Shell.getAdditionalBraindumpEntries(ADag workflow)	Returns a Map containing additional braindump entries that are specific to a Code Generator
java.util.Map<java.lang.String,java.lang.String>	Stork.getAdditionalBraindumpEntries(ADag workflow)	Returns an empty map
protected java.lang.String	Abstract.getDAGFilename(ADag dag, java.lang.String suffix)	Returns the name of the file on the basis of the metadata associated with the DAG.
protected java.lang.String	PBS.getPathtoPBSFile(ADag dag)	Returns the basename for the PBS script file for the dag
protected java.lang.String	PMC.getPathtoPMCFile(ADag dag)	Returns the basename for the pmc file for the dag
protected java.lang.String	Shell.getPathToShellScript(ADag dag)	Returns path to the shell script that is generated
protected java.lang.String	PBS.pbsBasename(ADag dag)	Returns the basename for the PBS file for the dag
protected java.lang.String	PMC.pmcBasename(ADag dag)	Returns the basename for the pmc file for the dag
protected void	Abstract.writeOutBraindump(ADag workflow)	Writes out the metrics file for the workflow
protected void	Abstract.writeOutDAXReplicaStore(ADag workflow)	Writes out the DAX replica store
void	NetloggerJobMapper.writeOutMappings(java.io.Writer writer, ADag dag)	Writes out the job mappings for a workflow.
protected void	Abstract.writeOutNotifications(ADag workflow)	Writes out the generator input file for the work-flow.
protected void	Abstract.writeOutStampedeEvents(ADag workflow)	Writes out the stampedeEventGenerator events for the workflow.

Uses of ADag in edu.isi.pegasus.planner.code.generator.condor

Fields in edu.isi.pegasus.planner.code.generator.condor declared as ADag

Modifier and Type	Field	Description
protected ADag	CondorGenerator.mConcreteWorkflow	The workflow for which the code has to be generated.
private ADag	SUBDAXGenerator.mDAG

Methods in edu.isi.pegasus.planner.code.generator.condor with parameters of type ADag

Modifier and Type	Method	Description
protected void	CondorGenerator.concreteDagEmpty(java.lang.String filename, ADag dag)	A callout method that dictates what needs to be done in case the concrete plan that is generated is empty.
protected java.lang.String	SUBDAXGenerator.createSubmitDirectory(ADag dag, java.lang.String dir, java.lang.String user, java.lang.String vogroup, boolean timestampBased)	Creates the submit directory for the workflow.
static void	ClassADSGenerator.generate(java.io.PrintWriter writer, ADag dag)	Writes out the classads for a workflow to corresponding writer stream.
static void	ClassADSGenerator.generate(java.io.PrintWriter writer, ADag dag, Job job)	Writes out the classads for a job to corresponding writer stream.
java.util.Collection<java.io.File>	CondorGenerator.generateCode(ADag dag)	Generates the code for the concrete workflow in Condor DAGMAN and CondorG input format.
void	CondorGenerator.generateCode(ADag dag, Job job)	Generates the code (condor submit file) for a single job.
java.util.Map<java.lang.String,java.lang.String>	CondorGenerator.getAdditionalBraindumpEntries(ADag workflow)	Returns a Map containing additional braindump entries that are specific to a Code Generator.
protected java.lang.String	CondorGenerator.getCondorLogInSubmitDirectory(ADag dag)	Returns the path to the condor log file in the submit directory.
protected java.lang.String	CondorGenerator.getDAGMANOutFilename(ADag dag)	Returns the basename of the file, that contains the output of the dagman while running the dag generated for the workflow.
void	SUBDAXGenerator.initialize(PegasusBag bag, ADag dag, java.io.PrintWriter dagWriter)	Initializes the class.
protected java.io.File	CondorGenerator.initializeDagFileWriter(java.lang.String filename, ADag workflow)	Initializes the file handler to the dag file and writes the header to it.
protected void	CondorGenerator.writeDagFileTail(ADag dag)	It writes the relations making up the DAG in the dag file and and closes the file handle to it.
protected void	CondorGenerator.writeDOTFile(java.lang.String filename, ADag dag)	Writes out the DOT file in the submit directory.
protected void	CondorGenerator.writeJobMapFile(java.lang.String filename, ADag dag)	Writes out the job map file in the submit directory.

Uses of ADag in edu.isi.pegasus.planner.code.gridstart

Fields in edu.isi.pegasus.planner.code.gridstart declared as ADag

Modifier and Type	Field	Description
private ADag	Kickstart.mConcDAG	The handle to the workflow that is being enabled.
private ADag	NoGridStart.mDAG
private ADag	PegasusLite.mDAG

Methods in edu.isi.pegasus.planner.code.gridstart with parameters of type ADag

Modifier and Type	Method	Description
void	Kickstart.initialize(PegasusBag bag, ADag dag)	Initializes the GridStart implementation.
void	NoGridStart.initialize(PegasusBag bag, ADag dag)	Initializes the GridStart implementation.
void	PegasusLite.initialize(PegasusBag bag, ADag dag)	Initializes the GridStart implementation.

Uses of ADag in edu.isi.pegasus.planner.parser.dax

Fields in edu.isi.pegasus.planner.parser.dax declared as ADag

Modifier and Type	Field	Description
private ADag	DAX2CDAG.mDag	The ADag object which contains information corresponding to the ADag in the XML file.

Uses of ADag in edu.isi.pegasus.planner.parser.pdax

Fields in edu.isi.pegasus.planner.parser.pdax declared as ADag

Modifier and Type	Field	Description
private ADag	PDAX2MDAG.mMegaDAG	The abstract dag object that ends up holding the megadag.

Uses of ADag in edu.isi.pegasus.planner.refiner

Fields in edu.isi.pegasus.planner.refiner declared as ADag

Modifier and Type	Field	Description
private ADag	MainEngine.mCleanupDag	The cleanup dag for the final concrete dag.
private ADag	RemoveDirectory.mConcDag	The concrete dag so far, for which the clean up dag needs to be generated.
protected ADag	CreateDirectory.mCurrentDag	It is a reference to the Concrete Dag so far.
protected ADag	DeployWorkerPackage.mCurrentDag	It is a reference to the Concrete Dag so far.
private ADag	InterPoolEngine.mDag	ADag object corresponding to the Dag whose jobs we want to schedule.
private ADag	ReplicaCatalogBridge.mDag	The DAG being worked upon.
private ADag	TransferEngine.mDag	The DAG object to which the transfer nodes are to be added.
private ADag	MainEngine.mOriginalDag	The Original Dag object which is constructed by parsing the dag file.
private ADag	MainEngine.mReducedDag	The reduced Dag object which is got from the Reduction Engine.
private ADag	DataReuseEngine.mWorkflow	The workflow object being worked upon.

Methods in edu.isi.pegasus.planner.refiner that return ADag

Modifier and Type	Method	Description
ADag	CleanupEngine.addCleanupJobs(ADag dag)	Adds the cleanup jobs in the workflow that removes the files staged to the remote site.
ADag	DeployWorkerPackage.addCleanupNodesForWorkerPackage(ADag dag)	Adds cleanup nodes in the workflow for sites specified.
ADag	CreateDirectory.addCreateDirectoryNodes(ADag dag)	It modifies the concrete dag passed in the constructor and adds the create random directory nodes to it at the root level.
ADag	RemoveDirectory.addRemoveDirectoryNodes(ADag dag)	Modifies the workflow to add remove directory nodes.
ADag	RemoveDirectory.addRemoveDirectoryNodes(ADag workflow, java.util.Set<java.lang.String> sites)	Adds create dir nodes to the workflow.
ADag	DeployWorkerPackage.addSetupNodes(ADag dag)	Adds a setup node per execution site in the workflow that will stage the worker node executables to the workdirectory on the sites the workflow has been scheduled to.
private ADag	DeployWorkerPackage.addSetupNodesWithoutUntarNodes(ADag dag, java.util.Set<java.lang.String> deploymentSites)	Adds only the stage worker nodes to the workflow.
private ADag	DeployWorkerPackage.addSetupNodesWithUntarNodes(ADag dag, java.util.Set<java.lang.String> deploymentSites)	Adds untar nodes to the workflow, in addition to the stage worker nodes
ADag	NodeCollapser.cluster(ADag dag)	Clusters the jobs in the workflow.
ADag	NodeCollapser.cluster(ADag dag, java.lang.String type)	Clusters the jobs in the workflow.
ADag	TestReduceEdges.createTest1()
ADag	TestReduceEdges.createTest2()
ADag	MainEngine.getCleanupDAG()	Returns the cleanup dag for the concrete dag.
ADag	DataReuseEngine.getWorkflow()	Returns a reference to the workflow that is being refined by the refiner.
ADag	InterPoolEngine.getWorkflow()	Returns a reference to the workflow that is being refined by the refiner.
ADag	Refiner.getWorkflow()	Returns a reference to the workflow that is being refined by the refiner.
ADag	ReduceEdges.reduce(ADag dag)	Prunes redundant edges from the workflow.
ADag	DataReuseEngine.reduceWorkflow(ADag workflow, ReplicaCatalogBridge rcb)	Reduces the workflow on the basis of the existence of lfn's in the replica catalog.
ADag	MainEngine.runPlanner()	The main function which calls the other engines and does the necessary work.

Methods in edu.isi.pegasus.planner.refiner with parameters of type ADag

Modifier and Type	Method	Description
ADag	CleanupEngine.addCleanupJobs(ADag dag)	Adds the cleanup jobs in the workflow that removes the files staged to the remote site.
ADag	DeployWorkerPackage.addCleanupNodesForWorkerPackage(ADag dag)	Adds cleanup nodes in the workflow for sites specified.
ADag	CreateDirectory.addCreateDirectoryNodes(ADag dag)	It modifies the concrete dag passed in the constructor and adds the create random directory nodes to it at the root level.
ADag	RemoveDirectory.addRemoveDirectoryNodes(ADag dag)	Modifies the workflow to add remove directory nodes.
ADag	RemoveDirectory.addRemoveDirectoryNodes(ADag workflow, java.util.Set<java.lang.String> sites)	Adds create dir nodes to the workflow.
ADag	DeployWorkerPackage.addSetupNodes(ADag dag)	Adds a setup node per execution site in the workflow that will stage the worker node executables to the workdirectory on the sites the workflow has been scheduled to.
private ADag	DeployWorkerPackage.addSetupNodesWithoutUntarNodes(ADag dag, java.util.Set<java.lang.String> deploymentSites)	Adds only the stage worker nodes to the workflow.
private ADag	DeployWorkerPackage.addSetupNodesWithUntarNodes(ADag dag, java.util.Set<java.lang.String> deploymentSites)	Adds untar nodes to the workflow, in addition to the stage worker nodes
ADag	NodeCollapser.cluster(ADag dag)	Clusters the jobs in the workflow.
ADag	NodeCollapser.cluster(ADag dag, java.lang.String type)	Clusters the jobs in the workflow.
protected java.util.Map	NodeCollapser.edgeList2Graph(ADag dag, java.util.Map nameIDMap)	Returns an adjacency list representation of the graph referred to by the list of edges.
private java.lang.String	TransferEngine.getCacheFileName(ADag adag)	Constructs the basename to the cache file that is to be used to log the transient files.
protected java.lang.String	DeployWorkerPackage.getCleanupJobname(ADag dag, java.lang.String site)	It returns the name of the untar job, that is to be assigned.
protected java.util.Set	RemoveDirectory.getCreateDirSites(ADag dag)	Retrieves the sites for which the create dir jobs need to be created.
protected java.lang.String	DeployWorkerPackage.getDeployJobName(ADag dag, java.lang.String site, boolean localTransfer)	It returns the name of the deployment job, that is to be assigned.
protected java.util.Set	DeployWorkerPackage.getDeploymentSites(ADag dag)	Retrieves the sites for which the deployment jobs need to be created.
private java.lang.String	RemoveDirectory.getRemoveDirJobName(ADag dag, java.lang.String site)	It returns the name of the remove directory job, that is to be assigned.
protected java.lang.String	DeployWorkerPackage.getUntarJobName(ADag dag, java.lang.String site)	It returns the name of the untar job, that is to be assigned.
void	DeployWorkerPackage.initialize(ADag scheduledDAG)	Initialize with the scheduled graph.
void	ReplicaCatalogBridge.initialize(ADag dag, PegasusBag bag)	Intialises the refiner.
void	ReplicaCatalogBridge.initialize(ADag dag, PegasusProperties properties, PlannerOptions options)	Intialises the refiner.
private ReplicaCatalog	TransferEngine.initializeWorkflowCacheFile(ADag dag)	Initializes a Replica Catalog Instance that is used to store the GET URL's for all files on the staging site ( inputs staged and outputs created ).
ADag	ReduceEdges.reduce(ADag dag)	Prunes redundant edges from the workflow.
ADag	DataReuseEngine.reduceWorkflow(ADag workflow, ReplicaCatalogBridge rcb)	Reduces the workflow on the basis of the existence of lfn's in the replica catalog.
void	InterPoolEngine.scheduleJobs(ADag dag, java.util.List sites)	It schedules a list of jobs on the execution pools by calling out to the site selector specified.

Constructors in edu.isi.pegasus.planner.refiner with parameters of type ADag

Constructor	Description
DataReuseEngine(ADag orgDag, PegasusBag bag)	The constructor
InterPoolEngine(ADag aDag, PegasusBag bag)	Overloaded constructor.
MainEngine(ADag orgDag, PegasusBag bag)	This constructor initialises the class variables to the variables passed.
RemoveDirectory(ADag concDag, PegasusBag bag, java.lang.String submitDirectory)	The overloaded constructor that sets the dag for which we have to generated the cleanup dag for.
ReplicaCatalogBridge(ADag dag, PegasusBag bag)	The overloaded constructor.
TransferEngine(ADag reducedDag, PegasusBag bag, java.util.List<Job> deletedJobs, java.util.List<Job> deletedLeafJobs)	Overloaded constructor.

Uses of ADag in edu.isi.pegasus.planner.refiner.createdir

Methods in edu.isi.pegasus.planner.refiner.createdir that return ADag

Modifier and Type	Method	Description
ADag	HourGlass.addCreateDirectoryNodes(ADag dag)	It modifies the concrete dag passed in the constructor and adds the create random directory nodes to it at the root level.
ADag	Minimal.addCreateDirectoryNodes(ADag dag)	Modifies the workflow to add create directory nodes.
ADag	Minimal.addCreateDirectoryNodes(ADag workflow, java.util.Set<java.lang.String> sites)	Adds create dir nodes to the workflow.
ADag	Strategy.addCreateDirectoryNodes(ADag dag)	Modifies the workflow to add create directory nodes.
ADag	Tentacles.addCreateDirectoryNodes(ADag dag)	Modifies the workflow to add create directory nodes.

Methods in edu.isi.pegasus.planner.refiner.createdir with parameters of type ADag

Modifier and Type	Method	Description
ADag	HourGlass.addCreateDirectoryNodes(ADag dag)	It modifies the concrete dag passed in the constructor and adds the create random directory nodes to it at the root level.
ADag	Minimal.addCreateDirectoryNodes(ADag dag)	Modifies the workflow to add create directory nodes.
ADag	Minimal.addCreateDirectoryNodes(ADag workflow, java.util.Set<java.lang.String> sites)	Adds create dir nodes to the workflow.
ADag	Strategy.addCreateDirectoryNodes(ADag dag)	Modifies the workflow to add create directory nodes.
ADag	Tentacles.addCreateDirectoryNodes(ADag dag)	Modifies the workflow to add create directory nodes.
protected java.lang.String	HourGlass.getConcatJobname(ADag dag)	Returns the name of the concat job
java.lang.String	AbstractStrategy.getCreateDirJobName(ADag dag, java.lang.String pool)	It returns the name of the create directory job, that is to be assigned.
static java.util.Set	AbstractStrategy.getCreateDirSites(ADag dag)	Retrieves the sites for which the create dir jobs need to be created.
private void	HourGlass.introduceRootDependencies(ADag dag, Job newRoot)	It traverses through the root jobs of the dag and introduces a new super root node to it.
Job	HourGlass.makeDummyConcatJob(ADag dag)	It creates a dummy concat job that is run at the local submit host.

Uses of ADag in edu.isi.pegasus.planner.selector

Methods in edu.isi.pegasus.planner.selector with parameters of type ADag

Modifier and Type	Method	Description
void	SiteSelector.mapWorkflow(ADag workflow, java.util.List sites)	Maps the jobs in the workflow to the various grid sites.

Uses of ADag in edu.isi.pegasus.planner.selector.site

Fields in edu.isi.pegasus.planner.selector.site declared as ADag

Modifier and Type	Field	Description
private ADag	NonJavaCallout.mAbstractDag	The abstract DAG.

Methods in edu.isi.pegasus.planner.selector.site with parameters of type ADag

Modifier and Type	Method	Description
void	AbstractPerJob.mapWorkflow(ADag workflow, java.util.List sites)	Maps the jobs in the workflow to the various grid sites.
void	Group.mapWorkflow(ADag workflow, java.util.List sites)	The call out to map a list of jobs on to the execution pools.
void	Heft.mapWorkflow(ADag workflow, java.util.List sites)	Maps the jobs in the workflow to the various grid sites.
void	Heft.mapWorkflow(ADag workflow, java.util.List sites, java.lang.String label)	Maps the jobs in the workflow to the various grid sites.
void	NonJavaCallout.mapWorkflow(ADag workflow, java.util.List sites)	Maps the jobs in the workflow to the various grid sites.

Uses of ADag in edu.isi.pegasus.planner.selector.site.heft

Methods in edu.isi.pegasus.planner.selector.site.heft with parameters of type ADag

Modifier and Type	Method	Description
void	Algorithm.schedule(ADag dag, java.util.List sites)	Schedules the workflow using the heft.
void	Algorithm.schedule(ADag workflow, java.util.List sites, java.lang.String label)	Schedules the workflow according to the HEFT algorithm.

Uses of ADag in edu.isi.pegasus.planner.transfer

Fields in edu.isi.pegasus.planner.transfer declared as ADag

Modifier and Type	Field	Description
protected ADag	AbstractRefiner.mDAG	The ADag object associated with the Dag.

Methods in edu.isi.pegasus.planner.transfer that return ADag

Modifier and Type	Method	Description
ADag	AbstractRefiner.getWorkflow()	Returns a reference to the workflow that is being refined by the refiner.

Constructors in edu.isi.pegasus.planner.transfer with parameters of type ADag

Constructor	Description
AbstractRefiner(ADag dag, PegasusBag bag)	The overloaded constructor.
MultipleFTPerXFERJobRefiner(ADag dag, PegasusBag bag)	The overloaded constructor.
SingleFTPerXFERJobRefiner(ADag dag, PegasusBag bag)	The overloaded constructor.

Uses of ADag in edu.isi.pegasus.planner.transfer.mapper

Methods in edu.isi.pegasus.planner.transfer.mapper with parameters of type ADag

Modifier and Type	Method	Description
void	OutputMapper.initialize(PegasusBag bag, ADag workflow)	Initializes the mappers.
static OutputMapper	OutputMapperFactory.loadInstance(ADag dag, PegasusBag bag)	Loads the implementing class corresponding to the value specified in the properties.
static OutputMapper	OutputMapperFactory.loadInstance(java.lang.String className, PegasusBag bag, ADag dag)	Loads the implementing class corresponding to the class.

Uses of ADag in edu.isi.pegasus.planner.transfer.mapper.impl

Methods in edu.isi.pegasus.planner.transfer.mapper.impl with parameters of type ADag

Modifier and Type	Method	Description
void	AbstractFileFactoryBasedMapper.initialize(PegasusBag bag, ADag workflow)	Initializes the mappers.
void	Fixed.initialize(PegasusBag bag, ADag workflow)	Initializes the mappers.
void	Flat.initialize(PegasusBag bag, ADag workflow)	Initializes the mappers.
void	Hashed.initialize(PegasusBag bag, ADag workflow)	Initializes the mappers.
void	Replica.initialize(PegasusBag bag, ADag workflow)	Initializes the mappers.
abstract org.griphyn.vdl.euryale.FileFactory	AbstractFileFactoryBasedMapper.instantiateFileFactory(PegasusBag bag, ADag workflow)	Method that instantiates the FileFactory
org.griphyn.vdl.euryale.FileFactory	Flat.instantiateFileFactory(PegasusBag bag, ADag workflow)	Instantiates a Flat File Factory and returns it.
org.griphyn.vdl.euryale.FileFactory	Hashed.instantiateFileFactory(PegasusBag bag, ADag workflow)	Method that instantiates the FileFactory

Uses of ADag in edu.isi.pegasus.planner.transfer.refiner

Methods in edu.isi.pegasus.planner.transfer.refiner with parameters of type ADag

Modifier and Type	Method	Description
static Refiner	RefinerFactory.loadInstance(ADag dag, PegasusBag bag)	Loads the implementing class corresponding to the value specified in the properties.
static Refiner	RefinerFactory.loadInstance(java.lang.String className, PegasusBag bag, ADag dag)	Loads the implementing class corresponding to the class.

Constructors in edu.isi.pegasus.planner.transfer.refiner with parameters of type ADag

Constructor	Description
BalancedCluster(ADag dag, PegasusBag bag)	The overloaded constructor.
Basic(ADag dag, PegasusBag bag)	The overloaded constructor.
Bundle(ADag dag, PegasusBag bag)	The overloaded constructor.
Chain(ADag dag, PegasusBag bag)	The overloaded constructor.
Cluster(ADag dag, PegasusBag bag)	The overloaded constructor.
Empty(ADag dag, PegasusBag bag)	The overloaded constructor.