uk.ac.cam.ch.wwmm.opsin

Class FragmentTest

java.lang.Object

uk.ac.cam.ch.wwmm.opsin.FragmentTest

public class FragmentTest
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
FragmentTest()

Method Summary

Methods

Modifier and Type	Method and Description
void	setUp()
void	testAddAtom()
void	testAddBond()
void	testConvertSpareValenciesToDoubleBonds()
void	testFindBond()
void	testFragment()
void	testGetAtomByID()
void	testGetAtomByLocant()
void	testGetAtomNeighbours()
void	testGetChainLength()
void	testGetIDFromLocant()
void	testImportFrag()
void	testIndicatedHydrogen()
void	testLabelAcetoanilide()
void	testLabelCarbamimidamido()
void	testLabelCarbonicDihydrazide()
void	testLabelCarbonimidoyl()
void	testLabelCarboximidohydrazide()
void	testLabelDiimidooxalicDiamide()
void	testLabelHexanDiamide()
void	testLabelHydrazinecarbohydrazide()
void	testLabelHydrazonate()
void	testLabelHydrazonicAmide()
void	testLabelHydrazonoHydrazide()
void	testLabelPiperazine()
void	testLabelPyridine()
void	testLabelSulfonoThioate()
void	testRelabelSuffixLocants()
void	testSpareValenciesOnAromaticAtoms()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FragmentTest

public FragmentTest()

Method Detail

setUp

public void setUp()

testFragment

public void testFragment()

testAddAtom

public void testAddAtom()

testAddBond

public void testAddBond()

testImportFrag

public void testImportFrag()
                    throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testGetIDFromLocant

public void testGetIDFromLocant()
                         throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testGetAtomByLocant

public void testGetAtomByLocant()
                         throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testGetAtomByID

public void testGetAtomByID()
                     throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testFindBond

public void testFindBond()
                  throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testGetChainLength

public void testGetChainLength()
                        throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testRelabelSuffixLocants

public void testRelabelSuffixLocants()
                              throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelCarbamimidamido

public void testLabelCarbamimidamido()
                              throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelHydrazonoHydrazide

public void testLabelHydrazonoHydrazide()
                                 throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelCarbonimidoyl

public void testLabelCarbonimidoyl()
                            throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelHydrazonicAmide

public void testLabelHydrazonicAmide()
                              throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelHydrazonate

public void testLabelHydrazonate()
                          throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelHexanDiamide

public void testLabelHexanDiamide()
                           throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelDiimidooxalicDiamide

public void testLabelDiimidooxalicDiamide()
                                   throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelHydrazinecarbohydrazide

public void testLabelHydrazinecarbohydrazide()
                                      throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelCarbonicDihydrazide

public void testLabelCarbonicDihydrazide()
                                  throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelSulfonoThioate

public void testLabelSulfonoThioate()
                             throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelAcetoanilide

public void testLabelAcetoanilide()
                           throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelPyridine

public void testLabelPyridine()
                       throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelPiperazine

public void testLabelPiperazine()
                         throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLabelCarboximidohydrazide

public void testLabelCarboximidohydrazide()
                                   throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testIndicatedHydrogen

public void testIndicatedHydrogen()
                           throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testSpareValenciesOnAromaticAtoms

public void testSpareValenciesOnAromaticAtoms()
                                       throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testConvertSpareValenciesToDoubleBonds

public void testConvertSpareValenciesToDoubleBonds()
                                            throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testGetAtomNeighbours

public void testGetAtomNeighbours()
                           throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException