uk.ac.cam.ch.wwmm.opsin

Class ComponentProcessorTest

java.lang.Object

uk.ac.cam.ch.wwmm.opsin.ComponentProcessorTest

public class ComponentProcessorTest
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
ComponentProcessorTest()

Method Summary

Methods

Modifier and Type	Method and Description
void	testDLStereochemistryDLOnAminoAcid()
void	testDLStereochemistryDOnAchiralAminoAcid()
void	testDLStereochemistryDOnAminoAcid()
void	testDLStereochemistryDOnCarbohydrate()
void	testDLStereochemistryDOnCarbohydratePrefix()
void	testDLStereochemistryInvertedNaturalOnCarbohydrate1()
void	testDLStereochemistryInvertedNaturalOnCarbohydrate2()
void	testDLStereochemistryLOnAminoAcid()
void	testDLStereochemistryLOnCarbohydrate()
void	testDStereochemistryDOnCarbohydratePrefix()
void	testLStereochemistryDOnCarbohydratePrefix()
void	testSubtractiveBiochemicalPreferredToRightMost()
void	testSubtractiveRightMostPreferred()
void	testSubtractiveWithBiochemicalToAttachTo()
void	testSubtractiveWithMultiplierAndLocants()
void	testSubtractiveWithNoGroupToAttachTo()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ComponentProcessorTest

public ComponentProcessorTest()

Method Detail

testSubtractiveWithNoGroupToAttachTo

public void testSubtractiveWithNoGroupToAttachTo()
                                          throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

testSubtractiveWithBiochemicalToAttachTo

public void testSubtractiveWithBiochemicalToAttachTo()
                                              throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

testSubtractiveRightMostPreferred

public void testSubtractiveRightMostPreferred()
                                       throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

testSubtractiveBiochemicalPreferredToRightMost

public void testSubtractiveBiochemicalPreferredToRightMost()
                                                    throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

testSubtractiveWithMultiplierAndLocants

public void testSubtractiveWithMultiplierAndLocants()
                                             throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

testDLStereochemistryLOnAminoAcid

public void testDLStereochemistryLOnAminoAcid()
                                       throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                              uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryDOnAminoAcid

public void testDLStereochemistryDOnAminoAcid()
                                       throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                              uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryDLOnAminoAcid

public void testDLStereochemistryDLOnAminoAcid()
                                        throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                               uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryDOnAchiralAminoAcid

public void testDLStereochemistryDOnAchiralAminoAcid()
                                              throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                     uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryLOnCarbohydrate

public void testDLStereochemistryLOnCarbohydrate()
                                          throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                 uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryDOnCarbohydrate

public void testDLStereochemistryDOnCarbohydrate()
                                          throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                 uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryInvertedNaturalOnCarbohydrate1

public void testDLStereochemistryInvertedNaturalOnCarbohydrate1()
                                                         throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                                uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryInvertedNaturalOnCarbohydrate2

public void testDLStereochemistryInvertedNaturalOnCarbohydrate2()
                                                         throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                                uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDStereochemistryDOnCarbohydratePrefix

public void testDStereochemistryDOnCarbohydratePrefix()
                                               throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                      uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testLStereochemistryDOnCarbohydratePrefix

public void testLStereochemistryDOnCarbohydratePrefix()
                                               throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                      uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

testDLStereochemistryDOnCarbohydratePrefix

public void testDLStereochemistryDOnCarbohydratePrefix()
                                                throws uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException,
                                                       uk.ac.cam.ch.wwmm.opsin.StructureBuildingException

Throws:

uk.ac.cam.ch.wwmm.opsin.ComponentGenerationException

uk.ac.cam.ch.wwmm.opsin.StructureBuildingException