| DBExporter | Extracts MS data from a OpenMS database |
| DBImporter | Imports an mzML file to an OpenMS database |
| FeatureLinkerBase | Base class for different FeatureLinker tools |
| PhosphoScoring | Tool to score phosphorylation sites of a peptide. |
| PILISIdentification | Performs an ProteinIdentification with PILIS |
| PILISModelCV | Perform a cross validation of the PILIS model parameters |
| PILISModelTrainer | Train the PILIS model with a given set of spectra and identifications |
| PILISSpectraGenerator | Generate spectra given a list of peptides and a PILIS model |
| SequestAdapter | Identifies peptides in MS/MS spectra via Sequest |
| Experimental List | |
| Improvements List | |
| Todo List | |
| Deprecated List |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Mon Aug 18 2014 14:41:12 using doxygen 1.8.7 |