| addCVTerm(CVTerm term, bool newBag) | libsbmlcs.SBase | |
| addCVTerm(CVTerm term) | libsbmlcs.SBase | |
| appendAnnotation(XMLNode annotation) | libsbmlcs.SBase | |
| appendAnnotation(string annotation) | libsbmlcs.SBase | |
| appendNotes(XMLNode notes) | libsbmlcs.SBase | |
| appendNotes(string notes) | libsbmlcs.SBase | |
| checkCompatibility(SBase arg0) | libsbmlcs.SBase | |
| checkMathMLNamespace(XMLToken elem) | libsbmlcs.SBase | |
| clearReferencedElement() | libsbmlcs.SBaseRef | |
| clone() | libsbmlcs.ReplacedBy | |
| connectToChild() | libsbmlcs.SBaseRef | |
| connectToParent(SBase parent) | libsbmlcs.SBase | |
| containsUndeclaredUnits() | libsbmlcs.SBase | |
| createSBaseRef() | libsbmlcs.SBaseRef | |
| disablePackage(string pkgURI, string pkgPrefix) | libsbmlcs.SBase | |
| Dispose() | libsbmlcs.ReplacedBy | virtual |
| divideAssignmentsToSIdByFunction(string id, ASTNode function) | libsbmlcs.SBase | |
| enablePackage(string pkgURI, string pkgPrefix, bool flag) | libsbmlcs.SBase | |
| enablePackageInternal(string pkgURI, string pkgPrefix, bool flag) | libsbmlcs.SBase | |
| Equals(Object sb) | libsbmlcs.SBase | |
| getAncestorOfType(int type, string pkgName) | libsbmlcs.SBase | |
| getAncestorOfType(int type) | libsbmlcs.SBase | |
| getAnnotation() | libsbmlcs.SBase | |
| getAnnotationString() | libsbmlcs.SBase | |
| getColumn() | libsbmlcs.SBase | |
| getCVTerm(long n) | libsbmlcs.SBase | |
| getCVTerms() | libsbmlcs.SBase | |
| getDerivedUnitDefinition() | libsbmlcs.SBase | |
| getElementByMetaId(string metaid) | libsbmlcs.SBaseRef | |
| getElementBySId(string id) | libsbmlcs.SBaseRef | |
| getElementFromPluginsByMetaId(string metaid) | libsbmlcs.SBase | |
| getElementFromPluginsBySId(string id) | libsbmlcs.SBase | |
| getElementName() | libsbmlcs.ReplacedBy | |
| GetHashCode() | libsbmlcs.SBase | |
| getId() | libsbmlcs.SBase | |
| getIdRef() | libsbmlcs.SBaseRef | |
| getLevel() | libsbmlcs.SBase | |
| getLine() | libsbmlcs.SBase | |
| getListOfAllElements(ElementFilter filter) | libsbmlcs.SBase | |
| getListOfAllElements() | libsbmlcs.SBase | |
| getListOfAllElementsFromPlugins(ElementFilter filter) | libsbmlcs.SBase | |
| getListOfAllElementsFromPlugins() | libsbmlcs.SBase | |
| getMetaId() | libsbmlcs.SBase | |
| getMetaIdRef() | libsbmlcs.SBaseRef | |
| getModel() | libsbmlcs.SBase | |
| getModelHistory() | libsbmlcs.SBase | |
| getName() | libsbmlcs.SBase | |
| getNamespaces() | libsbmlcs.SBase | |
| getNotes() | libsbmlcs.SBase | |
| getNotesString() | libsbmlcs.SBase | |
| getNumCVTerms() | libsbmlcs.SBase | |
| getNumPlugins() | libsbmlcs.SBase | |
| getNumReferents() | libsbmlcs.SBaseRef | |
| getPackageName() | libsbmlcs.CompBase | |
| getPackageURI() | libsbmlcs.CompBase | |
| getPackageVersion() | libsbmlcs.CompBase | |
| getParentModel(SBase child) | libsbmlcs.CompBase | static |
| getParentSBMLObject() | libsbmlcs.SBase | |
| getPlugin(string package) | libsbmlcs.SBase | |
| getPlugin(long n) | libsbmlcs.SBase | |
| getPortRef() | libsbmlcs.SBaseRef | |
| getPrefix() | libsbmlcs.SBase | |
| getReferencedElement() | libsbmlcs.SBaseRef | |
| getReferencedElementFrom(Model model) | libsbmlcs.SBaseRef | |
| getResourceBiologicalQualifier(string resource) | libsbmlcs.SBase | |
| getResourceModelQualifier(string resource) | libsbmlcs.SBase | |
| getSBaseRef() | libsbmlcs.SBaseRef | |
| getSBMLDocument() | libsbmlcs.SBase | |
| getSBMLNamespaces() | libsbmlcs.SBase | |
| getSBOTerm() | libsbmlcs.SBase | |
| getSBOTermAsURL() | libsbmlcs.SBase | |
| getSBOTermID() | libsbmlcs.SBase | |
| getSubmodelRef() | libsbmlcs.Replacing | |
| getTypeCode() | libsbmlcs.ReplacedBy | |
| getUnitRef() | libsbmlcs.SBaseRef | |
| getURI() | libsbmlcs.SBase | |
| getVersion() | libsbmlcs.SBase | |
| hasNonstandardIdentifierBeginningWith(string prefix) | libsbmlcs.SBase | |
| hasRequiredAttributes() | libsbmlcs.Replacing | |
| hasRequiredElements() | libsbmlcs.SBase | |
| hasValidLevelVersionNamespaceCombination() | libsbmlcs.SBase | |
| isPackageEnabled(string pkgName) | libsbmlcs.SBase | |
| isPackageURIEnabled(string pkgURI) | libsbmlcs.SBase | |
| isPkgEnabled(string pkgName) | libsbmlcs.SBase | |
| isPkgURIEnabled(string pkgURI) | libsbmlcs.SBase | |
| isSetAnnotation() | libsbmlcs.SBase | |
| isSetId() | libsbmlcs.SBase | |
| isSetIdRef() | libsbmlcs.SBaseRef | |
| isSetMetaId() | libsbmlcs.SBase | |
| isSetMetaIdRef() | libsbmlcs.SBaseRef | |
| isSetModelHistory() | libsbmlcs.SBase | |
| isSetName() | libsbmlcs.SBase | |
| isSetNotes() | libsbmlcs.SBase | |
| isSetPortRef() | libsbmlcs.SBaseRef | |
| isSetSBaseRef() | libsbmlcs.SBaseRef | |
| isSetSBOTerm() | libsbmlcs.SBase | |
| isSetSubmodelRef() | libsbmlcs.Replacing | |
| isSetUnitRef() | libsbmlcs.SBaseRef | |
| matchesRequiredSBMLNamespacesForAddition(SBase sb) | libsbmlcs.SBase | |
| matchesSBMLNamespaces(SBase sb) | libsbmlcs.SBase | |
| multiplyAssignmentsToSIdByFunction(string id, ASTNode function) | libsbmlcs.SBase | |
| operator!=(SBase lhs, SBase rhs) | libsbmlcs.SBase | static |
| operator==(SBase lhs, SBase rhs) | libsbmlcs.SBase | static |
| performDeletion() | libsbmlcs.SBaseRef | |
| performReplacement() | libsbmlcs.Replacing | |
| prependStringToAllIdentifiers(string prefix) | libsbmlcs.SBase | |
| removeFromParentAndDelete() | libsbmlcs.ReplacedBy | |
| removeTopLevelAnnotationElement(string elementName, string elementURI, bool removeEmpty) | libsbmlcs.SBase | |
| removeTopLevelAnnotationElement(string elementName, string elementURI) | libsbmlcs.SBase | |
| removeTopLevelAnnotationElement(string elementName) | libsbmlcs.SBase | |
| renameMetaIdRefs(string oldid, string newid) | libsbmlcs.SBase | |
| renameSIdRefs(string oldid, string newid) | libsbmlcs.Replacing | |
| renameUnitSIdRefs(string oldid, string newid) | libsbmlcs.SBase | |
| ReplacedBy(long level, long version, long pkgVersion) | libsbmlcs.ReplacedBy | |
| ReplacedBy(long level, long version) | libsbmlcs.ReplacedBy | |
| ReplacedBy(long level) | libsbmlcs.ReplacedBy | |
| ReplacedBy() | libsbmlcs.ReplacedBy | |
| ReplacedBy(CompPkgNamespaces compns) | libsbmlcs.ReplacedBy | |
| ReplacedBy(ReplacedBy source) | libsbmlcs.ReplacedBy | |
| replaceSIDWithFunction(string id, ASTNode function) | libsbmlcs.SBase | |
| replaceTopLevelAnnotationElement(XMLNode annotation) | libsbmlcs.SBase | |
| replaceTopLevelAnnotationElement(string annotation) | libsbmlcs.SBase | |
| replaceWithAndMaybeDelete(SBase replacement, bool deleteme, ASTNode conversionFactor) | libsbmlcs.Replacing | |
| saveReferencedElement() | libsbmlcs.Replacing | |
| SBaseRef(long level, long version, long pkgVersion) | libsbmlcs.SBaseRef | |
| SBaseRef(long level, long version) | libsbmlcs.SBaseRef | |
| SBaseRef(long level) | libsbmlcs.SBaseRef | |
| SBaseRef() | libsbmlcs.SBaseRef | |
| SBaseRef(CompPkgNamespaces compns) | libsbmlcs.SBaseRef | |
| SBaseRef(SBaseRef source) | libsbmlcs.SBaseRef | |
| setAnnotation(XMLNode annotation) | libsbmlcs.SBase | |
| setAnnotation(string annotation) | libsbmlcs.SBase | |
| setId(string sid) | libsbmlcs.SBase | |
| setIdRef(string id) | libsbmlcs.SBaseRef | |
| setMetaId(string metaid) | libsbmlcs.SBase | |
| setMetaIdRef(string id) | libsbmlcs.SBaseRef | |
| setModelHistory(ModelHistory history) | libsbmlcs.SBase | |
| setName(string name) | libsbmlcs.SBase | |
| setNamespaces(XMLNamespaces xmlns) | libsbmlcs.SBase | |
| setNotes(XMLNode notes) | libsbmlcs.SBase | |
| setNotes(string notes, bool addXHTMLMarkup) | libsbmlcs.SBase | |
| setNotes(string notes) | libsbmlcs.SBase | |
| setPortRef(string id) | libsbmlcs.SBaseRef | |
| setSBaseRef(SBaseRef sBaseRef) | libsbmlcs.SBaseRef | |
| setSBMLNamespacesAndOwn(SBMLNamespaces sbmlns) | libsbmlcs.SBase | |
| setSBOTerm(int value) | libsbmlcs.SBase | |
| setSBOTerm(string sboid) | libsbmlcs.SBase | |
| setSubmodelRef(string id) | libsbmlcs.Replacing | |
| setUnitRef(string id) | libsbmlcs.SBaseRef | |
| swigCMemOwn | libsbmlcs.SBase | protected |
| toSBML() | libsbmlcs.SBase | |
| toXMLNode() | libsbmlcs.SBase | |
| transformIdentifiers(IdentifierTransformer idTransformer) | libsbmlcs.SBase | |
| unsetAnnotation() | libsbmlcs.SBase | |
| unsetCVTerms() | libsbmlcs.SBase | |
| unsetId() | libsbmlcs.SBase | |
| unsetIdRef() | libsbmlcs.SBaseRef | |
| unsetMetaId() | libsbmlcs.SBase | |
| unsetMetaIdRef() | libsbmlcs.SBaseRef | |
| unsetModelHistory() | libsbmlcs.SBase | |
| unsetName() | libsbmlcs.SBase | |
| unsetNotes() | libsbmlcs.SBase | |
| unsetPortRef() | libsbmlcs.SBaseRef | |
| unsetSBaseRef() | libsbmlcs.SBaseRef | |
| unsetSBOTerm() | libsbmlcs.SBase | |
| unsetSubmodelRef() | libsbmlcs.Replacing | |
| unsetUnitRef() | libsbmlcs.SBaseRef | |
| updateIDs(SBase oldnames, SBase newnames) | libsbmlcs.ReplacedBy | |
| writeExtensionElements(XMLOutputStream stream) | libsbmlcs.SBase | |
