peptide.h File Reference

peptide model More...

#include <vector>
#include <memory>
#include <QString>
#include "../amino_acid/aa.h"
#include "peptideinterface.h"
#include <cstdint>
#include "../exportinmportconfig.h"

Go to the source code of this file.

Classes
class	pappso::Peptide

Namespaces
	pappso
	tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge

Typedefs
typedef std::shared_ptr< Peptide >	pappso::NoConstPeptideSp

Enumerations
enum	pappso::PeptideDirection : std::int8_t { pappso::PeptideDirection::Nter = 0, pappso::PeptideDirection::Cter = 1 }
enum	pappso::PeptideIonNter {   pappso::PeptideIonNter::b, pappso::PeptideIonNter::bstar, pappso::PeptideIonNter::bo, pappso::PeptideIonNter::a,   pappso::PeptideIonNter::astar, pappso::PeptideIonNter::ao, pappso::PeptideIonNter::bp, pappso::PeptideIonNter::c }
enum	pappso::PeptideIonCter {   pappso::PeptideIonCter::y, pappso::PeptideIonCter::ystar, pappso::PeptideIonCter::yo, pappso::PeptideIonCter::z,   pappso::PeptideIonCter::yp, pappso::PeptideIonCter::x }

Functions
bool	pappso::peptideIonIsNter (PeptideIon ion_type)
	tells if an ion is Nter More...
PeptideDirection	pappso::getPeptideIonDirection (PeptideIon ion_type)
	get the direction of a peptide ion More...

Detailed Description

peptide model

Date

7/3/2015

Author

Olivier Langella

Definition in file peptide.h.