pappso::TimsData Member List

This is the complete list of members for pappso::TimsData, including all inherited members.

extractXicListByPrecursorIds(const std::vector< std::size_t > &precursor_id_list, PrecisionPtr precision_ptr, XicExtractMethod xicExtractMethod, double rtRange) const	pappso::TimsData	private
getClosestPrecursorIdByMz(std::vector< std::vector< double >> ids, double mz_value)	pappso::TimsData	private
getMassSpectrumCstSPtr(std::size_t timsId, std::size_t scanNum)	pappso::TimsData
getMassSpectrumCstSPtrByRawIndex(std::size_t raw_index)	pappso::TimsData
getMatchPrecursorIdByKo(std::vector< std::vector< double >> ids, double ko_value)	pappso::TimsData	private
getMs2BuiltinCentroid() const	pappso::TimsData
getMsLevelBySpectrumIndex(std::size_t spectrum_index)	pappso::TimsData
getPrecursorsFromMzRtCharge(int charge, double mz_val, double rt_sec, double k0)	pappso::TimsData
getQualifiedMassSpectrumByRawIndex(std::size_t spectrum_index, bool want_binary_data)	pappso::TimsData
getQualifiedMs1MassSpectrumByPrecursorId(std::size_t ms2_index, std::size_t precursor_index, bool want_binary_data)	pappso::TimsData
getQualifiedMs2MassSpectrumByPrecursorId(QualifiedMassSpectrum &mass_spectrum, std::size_t ms2_index, std::size_t precursor_index, bool want_binary_data)	pappso::TimsData
getRawIndexFromCoordinate(std::size_t frame_id, std::size_t scan_num) const	pappso::TimsData	private
getScanCoordinateFromRawIndex(std::size_t spectrum_index) const	pappso::TimsData	private
getTimsFrameBaseCstSPtr(std::size_t timsId) const	pappso::TimsData	private
getTimsFrameBaseCstSPtrCached(std::size_t timsId)	pappso::TimsData	private
getTimsFrameCstSPtr(std::size_t timsId) const	pappso::TimsData
getTimsFrameCstSPtrCached(std::size_t timsId)	pappso::TimsData	private
getTimsMS1FrameIdRange(double rt_begin, double rt_end) const	pappso::TimsData
getTotalNumberOfPrecursors() const	pappso::TimsData
getTotalNumberOfScans() const	pappso::TimsData
m_builtinMs2Centroid	pappso::TimsData	private
m_cacheSize	pappso::TimsData	private
m_mapMzCalibrationRecord	pappso::TimsData	private
m_mutex	pappso::TimsData	private
m_timsDataDirectory	pappso::TimsData	private
m_timsFrameBaseCache	pappso::TimsData	private
m_timsFrameCache	pappso::TimsData	private
m_totalNumberOfPrecursors	pappso::TimsData	private
m_totalNumberOfScans	pappso::TimsData	private
mcsp_ms1Filter	pappso::TimsData	private
mcsp_ms2Filter	pappso::TimsData	private
mpa_mzCalibrationStore	pappso::TimsData	private
mpa_timsBinDec	pappso::TimsData	private
openDatabaseConnection() const	pappso::TimsData	private
setMs1FilterCstSPtr(pappso::FilterInterfaceCstSPtr &filter)	pappso::TimsData
setMs2BuiltinCentroid(bool centroid)	pappso::TimsData
setMs2FilterCstSPtr(pappso::FilterInterfaceCstSPtr &filter)	pappso::TimsData
TimsData(QDir timsDataDirectory)	pappso::TimsData
TimsData(const TimsData &other)	pappso::TimsData
~TimsData()	pappso::TimsData