Package pal.misc
Interface Report
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- All Known Subinterfaces:
AnnotationAlignment,CharacterAlignment,RateMatrix,SubstitutionModel
- All Known Implementing Classes:
AbstractAlignment,AbstractRateMatrix,AminoAcidModel,BLOSUM62,BootstrappedAlignment,CachedRateMatrix,ClusterTree,CoalescentIntervals,CodonModel,ConcatenatedAlignment,ConcatenatedAnnotatedAlignment,ConstantMutationRate,ConstantPopulation,ConstExpConst,ConstExpGrowth,CPREV,Dayhoff,DemographicModel,ExpandingPopulation,ExponentialGrowth,F81,F84,GammaRates,GapBalancedAlignment,GeneralRateDistributionSubstitutionModel,GTR,HKY,IndelAlignment,IndelAnnotatedAlignment,InvariableSites,JTT,JumbledAlignment,KishinoHasegawaTest,ModelSupport,MTREV24,MultiLocusAnnotatedAlignment,MutationRateModel,NeighborJoiningTree,NucleotideModel,RateDistribution,ReadAlignment,ReadAlignmentOld,ReadTree,ShimodairaHasegawaTest,SimpleAlignment,SimpleAnnotatedAlignment,SimpleCharacterAlignment,SimpleTree,SimulatedAlignment,SingleClassSubstitutionModel,SitePattern,SkylinePlot,SteppedMutationRate,StrippedAlignment,StrippedAnnotatedAlignment,SUPGMATree,TN,Tree.TreeBase,TwoStateModel,UniformRate,UPGMATree,VT,WAG,WindowedMutationRate,YangCodonModel,YangCodonModel.SimpleNeutralSelection,YangCodonModel.SimplePositiveSelection
public interface Reportinterface for classes that can print out a human readable report of itself- Version:
- $Id: Report.java,v 1.4 2002/12/05 04:27:28 matt Exp $
- Author:
- Korbinian Strimmer
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description voidreport(java.io.PrintWriter out)print human readable report (e.g., on parameters and associated model)
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