Uses of Interface
pal.math.OrderEnumerator
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Packages that use OrderEnumerator Package Description pal.math Classes for math stuff such as optimisation, numerical derivatives, matrix exponentials, random numbers, special function etc.pal.tree Classes for providing the data structure of trees, for constructing and modifying trees, and for parameterizing trees (e.g., clock constraint). -
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Uses of OrderEnumerator in pal.math
Methods in pal.math that return OrderEnumerator Modifier and Type Method Description OrderEnumeratorOrderEnumerator.OEFactory. createOrderEnumerator(int size)For generating an ordering from 0..size-1.static OrderEnumeratorOrderEnumerator.Utils. getAdjusted(OrderEnumerator toAdjust, int adjustmentFactor)static OrderEnumeratorOrderEnumerator.Utils. getAlternating(OrderEnumerator primary, OrderEnumerator secondary)static OrderEnumeratorOrderEnumerator.Utils. getBiasAlternating(OrderEnumerator primary, OrderEnumerator secondary)static OrderEnumeratorOrderEnumerator.Utils. getConstant(int index)static OrderEnumeratorOrderEnumerator.Utils. getOrdered(int size)static OrderEnumeratorOrderEnumerator.Utils. getRestricted(OrderEnumerator toRestrict, int minimum, int range)static OrderEnumeratorOrderEnumerator.Utils. getShuffled(int size)OrderEnumeratorOrthogonalHints. getSuggestedOrdering(OrderEnumerator defaultOrdering)If there is a "best" ordering to use it can be specified here, if not should return nullstatic OrderEnumeratorOrderEnumerator.Utils. getZero()Methods in pal.math with parameters of type OrderEnumerator Modifier and Type Method Description static OrderEnumeratorOrderEnumerator.Utils. getAdjusted(OrderEnumerator toAdjust, int adjustmentFactor)static OrderEnumeratorOrderEnumerator.Utils. getAlternating(OrderEnumerator primary, OrderEnumerator secondary)static OrderEnumeratorOrderEnumerator.Utils. getBiasAlternating(OrderEnumerator primary, OrderEnumerator secondary)static OrderEnumeratorOrderEnumerator.Utils. getRestricted(OrderEnumerator toRestrict, int minimum, int range)OrderEnumeratorOrthogonalHints. getSuggestedOrdering(OrderEnumerator defaultOrdering)If there is a "best" ordering to use it can be specified here, if not should return null -
Uses of OrderEnumerator in pal.tree
Methods in pal.tree that return OrderEnumerator Modifier and Type Method Description OrderEnumeratorMutationRateModelTree. getSuggestedOrdering(OrderEnumerator defaultOrdering)Methods in pal.tree with parameters of type OrderEnumerator Modifier and Type Method Description OrderEnumeratorMutationRateModelTree. getSuggestedOrdering(OrderEnumerator defaultOrdering)
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