Uses of Interface
pal.alignment.AlignmentReceiver
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Packages that use AlignmentReceiver Package Description pal.alignment Classes dealing with sequence alignments, including methods for reading and printing in several possible formats, as well as rearranging and concatenating. -
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Uses of AlignmentReceiver in pal.alignment
Classes in pal.alignment that implement AlignmentReceiver Modifier and Type Class Description static classAlignmentReceiver.BucketReceiverThe SingleReceiver only keeps track of one alignment, the last one it receivedstatic classAlignmentReceiver.SingleReceiverThe SingleReceiver only keeps track of one alignment, the last one it receivedMethods in pal.alignment with parameters of type AlignmentReceiver Modifier and Type Method Description static voidAlignmentReaders. readPhylipClustalAlignment(java.io.Reader r, DataType dt, AlignmentReceiver receiver)Read an alignment in phylip/clustal/simple format.
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