jebl.evolution.trees
Class ReRootedTree

java.lang.Object
  jebl.evolution.trees.FilteredRootedTree
      jebl.evolution.trees.ReRootedTree

All Implemented Interfaces:

Graph, RootedTree, Tree, Attributable

public class ReRootedTree
extends FilteredRootedTree

Version:

$Id: ReRootedTree.java 776 2007-09-05 11:17:12Z rambaut $

Author:

Andrew Rambaut, Alexei Drummond

Nested Class Summary

static class

ReRootedTree.RootingType

Nested classes/interfaces inherited from interface jebl.evolution.graphs.Graph

Graph.NoEdgeException, Graph.Utils

Constructor Summary

ReRootedTree(RootedTree source, ReRootedTree.RootingType rootingType)

Method Summary

Methods inherited from class jebl.evolution.trees.FilteredRootedTree

conceptuallyUnrooted, getAdjacencies, getAttribute, getAttributeMap, getAttributeNames, getChildren, getEdge, getEdgeLength, getEdges, getEdges, getExternalEdges, getExternalNodes, getHeight, getInternalEdges, getInternalNodes, getLength, getNode, getNodes, getNodes, getNodes, getParent, getRootNode, getSource, getTaxa, getTaxon, hasHeights, hasLengths, isExternal, isRoot, removeAttribute, renameTaxa, setAttribute

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ReRootedTree

public ReRootedTree(RootedTree source,
                    ReRootedTree.RootingType rootingType)