Uses of Class
htsjdk.samtools.SAMRecordDuplicateComparator

Packages that use SAMRecordDuplicateComparator

Package	Description
htsjdk.samtools

Uses of SAMRecordDuplicateComparator in htsjdk.samtools

Constructors in htsjdk.samtools with parameters of type SAMRecordDuplicateComparator

Constructor and Description
DuplicateSet(boolean setDuplicateFlag, SAMRecordDuplicateComparator comparator)
DuplicateSet(SAMRecordDuplicateComparator comparator)
DuplicateSetIterator(CloseableIterator<SAMRecord> iterator, SAMFileHeader header, boolean preSorted, SAMRecordDuplicateComparator comparator) Allows the user of this iterator to skip the sorting of the input if the input is already sorted.