itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType > Class Template Reference

#include <itkTransformRigidityPenaltyTerm.h>

Detailed Description

template<class TFixedImage, class TScalarType>
class itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >

A cost function that calculates a rigidity penalty term.

A cost function that calculates a rigidity penalty term based on the B-spline coefficients of a B-spline transformation. This penalty term is a function of the 1st and 2nd order spatial derivatives of a transformation.

The intended use for this metric is to filter a B-spline coefficient image in order to calculate a rigidity penalty term on a B-spline transform.

The RigidityPenaltyTermValueImageFilter at each pixel location is computed by convolution with some separable 1D kernels.

The rigid penalty term penalizes deviations from a rigid transformation at regions specified by the so-called rigidity images.

This metric only works with B-splines as a transformation model.

References:
[1] M. Staring, S. Klein and J.P.W. Pluim, "A Rigidity Penalty Term for Nonrigid Registration," Medical Physics, vol. 34, no. 11, pp. 4098 - 4108, November 2007.

See also

BSplineTransform

Definition at line 71 of file itkTransformRigidityPenaltyTerm.h.

Inheritance diagram for itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >:

Public Types
typedef Superclass::BSplineOrder1TransformPointer	BSplineOrder1TransformPointer
typedef Superclass::BSplineOrder1TransformType	BSplineOrder1TransformType
typedef Superclass::BSplineOrder2TransformPointer	BSplineOrder2TransformPointer
typedef Superclass::BSplineOrder2TransformType	BSplineOrder2TransformType
typedef Superclass::BSplineOrder3TransformPointer	BSplineOrder3TransformPointer
typedef Superclass::BSplineOrder3TransformType	BSplineOrder3TransformType
typedef BSplineTransformType::Pointer	BSplineTransformPointer
typedef BSplineOrder3TransformType	BSplineTransformType
typedef ImageRegionIterator< CoefficientImageType >	CoefficientImageIteratorType
typedef CoefficientImageType::Pointer	CoefficientImagePointer
typedef CoefficientImageType::SpacingType	CoefficientImageSpacingType
typedef BSplineTransformType::ImageType	CoefficientImageType
typedef Superclass::CombinationTransformType	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::DerivativeValueType	DerivativeValueType
typedef DilateFilterType::Pointer	DilateFilterPointer
typedef GrayscaleDilateImageFilter< RigidityImageType, RigidityImageType, StructuringElementType >	DilateFilterType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef BSplineTransformType::SpacingType	GridSpacingType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InternalMatrixType	InternalMatrixType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::JacobianOfSpatialHessianType	JacobianOfSpatialHessianType
typedef Superclass::JacobianOfSpatialJacobianType	JacobianOfSpatialJacobianType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef NeighborhoodIterator< CoefficientImageType >	NeighborhoodIteratorType
typedef NeighborhoodType::SizeType	NeighborhoodSizeType
typedef Neighborhood< ScalarType, itkGetStaticConstMacro(FixedImageDimension) >	NeighborhoodType
typedef NeighborhoodOperatorImageFilter< CoefficientImageType, CoefficientImageType >	NOIFType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef NeighborhoodIteratorType::RadiusType	RadiusType
typedef Superclass::RealType	RealType
typedef RigidityImageType::IndexType	RigidityImageIndexType
typedef ImageRegionIterator< RigidityImageType >	RigidityImageIteratorType
typedef RigidityImageType::Pointer	RigidityImagePointer
typedef RigidityImageType::PointType	RigidityImagePointType
typedef RigidityImageType::RegionType	RigidityImageRegionType
typedef CoefficientImageType	RigidityImageType
typedef RigidityImageType::PixelType	RigidityPixelType
typedef Superclass::ScalarType	ScalarType
typedef TransformRigidityPenaltyTerm	Self
typedef StructuringElementType::RadiusType	SERadiusType
typedef Superclass::SpatialHessianType	SpatialHessianType
typedef Superclass::SpatialJacobianType	SpatialJacobianType
typedef BinaryBallStructuringElement< RigidityPixelType, itkGetStaticConstMacro(FixedImageDimension) >	StructuringElementType
typedef TransformPenaltyTerm< TFixedImage, TScalarType >	Superclass
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
typedef Superclass::BSplineOrder1TransformPointer	BSplineOrder1TransformPointer
typedef Superclass::BSplineOrder1TransformType	BSplineOrder1TransformType
typedef Superclass::BSplineOrder2TransformPointer	BSplineOrder2TransformPointer
typedef Superclass::BSplineOrder2TransformType	BSplineOrder2TransformType
typedef Superclass::BSplineOrder3TransformPointer	BSplineOrder3TransformPointer
typedef Superclass::BSplineOrder3TransformType	BSplineOrder3TransformType
typedef Superclass::CombinationTransformType	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::DerivativeValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::InputPointType	InputPointType
typedef TransformType::InternalMatrixType	InternalMatrixType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef TransformType::JacobianOfSpatialHessianType	JacobianOfSpatialHessianType
typedef TransformType::JacobianOfSpatialJacobianType	JacobianOfSpatialJacobianType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TScalarType	ScalarType
typedef TransformPenaltyTerm	Self
typedef TransformType::SpatialHessianType	SpatialHessianType
typedef TransformType::SpatialJacobianType	SpatialJacobianType
typedef AdvancedImageToImageMetric< TFixedImage, TFixedImage >	Superclass
typedef Superclass::ThreaderType	ThreaderType
typedef Superclass::ThreadInfoType	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::AdvancedTransformType	TransformType
Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType
typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType
typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType
typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType
typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer
typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::PixelType	FixedImagePixelType
typedef FixedImageType::Pointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef vnl_sparse_matrix< HessianValueType >	HessianType
typedef DerivativeType::ValueType	HessianValueType
typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer
typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType
typedef ImageSamplerType::Pointer	ImageSamplerPointer
typedef ImageSamplerBase< FixedImageType >	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType
typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType
typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer
typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef MovingImageType::Pointer	MovingImagePointer
typedef MovingImageType::RegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef AdvancedImageToImageMetric	Self
typedef ImageToImageMetric< TFixedImage, TFixedImage >	Superclass
typedef itk::MultiThreader	ThreaderType
typedef ThreaderType::ThreadInfoStruct	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType

Public Member Functions
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
void	CheckUseAndCalculationBooleans (void)
void	FillRigidityCoefficientImage (const ParametersType &parameters) const
virtual const char *	GetClassName () const
virtual void	GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const
virtual const MeasureType &	GetLinearityConditionGradientMagnitude ()
virtual const MeasureType &	GetLinearityConditionValue ()
virtual ScalarType	GetLinearityConditionWeight ()
virtual const MeasureType &	GetOrthonormalityConditionGradientMagnitude ()
virtual const MeasureType &	GetOrthonormalityConditionValue ()
virtual ScalarType	GetOrthonormalityConditionWeight ()
virtual const MeasureType &	GetPropernessConditionGradientMagnitude ()
virtual const MeasureType &	GetPropernessConditionValue ()
virtual ScalarType	GetPropernessConditionWeight ()
virtual MeasureType	GetValue (const ParametersType &parameters) const
virtual void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const
virtual void	Initialize (void) throw ( ExceptionObject )
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (ImageDimension, unsigned int, FixedImageType::ImageDimension)
virtual void	SetBSplineTransform (BSplineTransformType *_arg)
virtual void	SetCalculateLinearityCondition (bool _arg)
virtual void	SetCalculateOrthonormalityCondition (bool _arg)
virtual void	SetCalculatePropernessCondition (bool _arg)
virtual void	SetDilateRigidityImages (bool _arg)
virtual void	SetDilationRadiusMultiplier (CoordinateRepresentationType _arg)
virtual void	SetFixedRigidityImage (RigidityImageType *_arg)
virtual void	SetLinearityConditionWeight (ScalarType _arg)
virtual void	SetMovingRigidityImage (RigidityImageType *_arg)
virtual void	SetOrthonormalityConditionWeight (ScalarType _arg)
virtual void	SetPropernessConditionWeight (ScalarType _arg)
virtual void	SetUseFixedRigidityImage (bool _arg)
virtual void	SetUseLinearityCondition (bool _arg)
virtual void	SetUseMovingRigidityImage (bool _arg)
virtual void	SetUseOrthonormalityCondition (bool _arg)
virtual void	SetUsePropernessCondition (bool _arg)
Public Member Functions inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
virtual double	GetFixedLimitRangeRatio () const
virtual ImageSamplerType *	GetImageSampler (void) const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
const AdvancedTransformType *	GetTransform (void) const ITK_OVERRIDE
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
	itkStaticConstMacro (MovingImageDimension, unsigned int, TFixedImage ::ImageDimension)
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetNumberOfThreads (ThreadIdType numberOfThreads)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
void	PrintSelf (std::ostream &os, Indent indent) const
	TransformRigidityPenaltyTerm ()
virtual	~TransformRigidityPenaltyTerm ()
Protected Member Functions inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
virtual bool	CheckForBSplineTransform2 (BSplineOrder3TransformPointer &bspline) const
	TransformPenaltyTerm ()
virtual	~TransformPenaltyTerm ()
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &value) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
virtual void	CheckForAdvancedTransform (void)
virtual void	CheckForBSplineInterpolator (void)
virtual void	CheckForBSplineTransform (void) const
virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual void	ComputeFixedImageExtrema (const FixedImageType *image, const FixedImageRegionType &region)
virtual void	ComputeMovingImageExtrema (const MovingImageType *image, const MovingImageRegionType &region)
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
virtual void	InitializeImageSampler (void) throw ( ExceptionObject )
virtual void	InitializeLimiters (void)
virtual void	InitializeThreadingParameters (void) const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback (void) const
void	LaunchGetValueThreaderCallback (void) const
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType threadID)
virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)
virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
virtual	~AdvancedImageToImageMetric ()

Private Member Functions
void	Create1DOperator (NeighborhoodType &F, const std::string &whichF, const unsigned int WhichDimension, const CoefficientImageSpacingType &spacing) const
void	CreateNDOperator (NeighborhoodType &F, const std::string &whichF, const CoefficientImageSpacingType &spacing) const
virtual void	DilateRigidityImages (void)
CoefficientImagePointer	FilterSeparable (const CoefficientImageType *, const std::vector< NeighborhoodType > &Operators) const
void	operator= (const Self &)
	TransformRigidityPenaltyTerm (const Self &)

Private Attributes
BSplineTransformPointer	m_BSplineTransform
bool	m_CalculateLinearityCondition
bool	m_CalculateOrthonormalityCondition
bool	m_CalculatePropernessCondition
bool	m_DilateRigidityImages
CoordinateRepresentationType	m_DilationRadiusMultiplier
RigidityImagePointer	m_FixedRigidityImage
RigidityImagePointer	m_FixedRigidityImageDilated
std::vector< DilateFilterPointer >	m_FixedRigidityImageDilation
MeasureType	m_LinearityConditionGradientMagnitude
MeasureType	m_LinearityConditionValue
ScalarType	m_LinearityConditionWeight
RigidityImagePointer	m_MovingRigidityImage
RigidityImagePointer	m_MovingRigidityImageDilated
std::vector< DilateFilterPointer >	m_MovingRigidityImageDilation
MeasureType	m_OrthonormalityConditionGradientMagnitude
MeasureType	m_OrthonormalityConditionValue
ScalarType	m_OrthonormalityConditionWeight
MeasureType	m_PropernessConditionGradientMagnitude
MeasureType	m_PropernessConditionValue
ScalarType	m_PropernessConditionWeight
RigidityImagePointer	m_RigidityCoefficientImage
bool	m_RigidityCoefficientImageIsFilled
MeasureType	m_RigidityPenaltyTermValue
bool	m_UseFixedRigidityImage
bool	m_UseLinearityCondition
bool	m_UseMovingRigidityImage
bool	m_UseOrthonormalityCondition
bool	m_UsePropernessCondition

Additional Inherited Members
Protected Types inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
typedef Superclass::FixedImageIndexType	FixedImageIndexType
typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType
typedef Superclass::FixedImagePointType	FixedImagePointType
typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType
typedef Superclass::MovingImageIndexType	MovingImageIndexType
typedef Superclass::MovingImagePointType	MovingImagePointType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType
typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer
typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType
typedef FixedImageType::IndexType	FixedImageIndexType
typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType
typedef TransformType::InputPointType	FixedImagePointType
typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType
typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType
typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType
typedef MovingImageType::IndexType	MovingImageIndexType
typedef TransformType::OutputPointType	MovingImagePointType
typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
static ITK_THREAD_RETURN_TYPE	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_TYPE	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_TYPE	GetValueThreaderCallback (void *arg)
Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
AdvancedTransformType::Pointer	m_AdvancedTransform
BSplineInterpolatorPointer	m_BSplineInterpolator
BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat
CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter
FixedImageLimiterPointer	m_FixedImageLimiter
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables
ThreadIdType	m_GetValuePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
bool	m_InterpolatorIsBSpline
bool	m_InterpolatorIsBSplineFloat
bool	m_InterpolatorIsLinear
bool	m_InterpolatorIsReducedBSpline
LinearInterpolatorPointer	m_LinearInterpolator
MovingImageLimiterPointer	m_MovingImageLimiter
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsAdvanced
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
bool	m_UseOpenMP

Member Typedef Documentation

BSplineOrder1TransformPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::BSplineOrder1TransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder1TransformPointer

Definition at line 129 of file itkTransformRigidityPenaltyTerm.h.

BSplineOrder1TransformType

template<class TFixedImage, class TScalarType>

typedef Superclass::BSplineOrder1TransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder1TransformType

Definition at line 128 of file itkTransformRigidityPenaltyTerm.h.

BSplineOrder2TransformPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::BSplineOrder2TransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder2TransformPointer

Definition at line 131 of file itkTransformRigidityPenaltyTerm.h.

BSplineOrder2TransformType

template<class TFixedImage, class TScalarType>

typedef Superclass::BSplineOrder2TransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder2TransformType

Definition at line 130 of file itkTransformRigidityPenaltyTerm.h.

BSplineOrder3TransformPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::BSplineOrder3TransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder3TransformPointer

Definition at line 133 of file itkTransformRigidityPenaltyTerm.h.

BSplineOrder3TransformType

template<class TFixedImage, class TScalarType>

typedef Superclass::BSplineOrder3TransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder3TransformType

Definition at line 132 of file itkTransformRigidityPenaltyTerm.h.

BSplineTransformPointer

template<class TFixedImage, class TScalarType>

typedef BSplineTransformType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineTransformPointer

Definition at line 152 of file itkTransformRigidityPenaltyTerm.h.

BSplineTransformType

template<class TFixedImage, class TScalarType>

typedef BSplineOrder3TransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineTransformType

Typedef's for B-spline transform.

Definition at line 151 of file itkTransformRigidityPenaltyTerm.h.

CoefficientImageIteratorType

template<class TFixedImage, class TScalarType>

typedef ImageRegionIterator< CoefficientImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageIteratorType

Definition at line 162 of file itkTransformRigidityPenaltyTerm.h.

CoefficientImagePointer

template<class TFixedImage, class TScalarType>

typedef CoefficientImageType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImagePointer

Definition at line 155 of file itkTransformRigidityPenaltyTerm.h.

CoefficientImageSpacingType

template<class TFixedImage, class TScalarType>

typedef CoefficientImageType::SpacingType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageSpacingType

Definition at line 156 of file itkTransformRigidityPenaltyTerm.h.

CoefficientImageType

template<class TFixedImage, class TScalarType>

typedef BSplineTransformType::ImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageType

Definition at line 154 of file itkTransformRigidityPenaltyTerm.h.

CombinationTransformType

template<class TFixedImage, class TScalarType>

typedef Superclass::CombinationTransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CombinationTransformType

Typedef's for the B-spline transform.

Definition at line 127 of file itkTransformRigidityPenaltyTerm.h.

ConstPointer

template<class TFixedImage, class TScalarType>

typedef SmartPointer< const Self > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ConstPointer

Definition at line 81 of file itkTransformRigidityPenaltyTerm.h.

CoordinateRepresentationType

template<class TFixedImage, class TScalarType>

typedef Superclass::CoordinateRepresentationType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoordinateRepresentationType

Typedefs inherited from the superclass.

Definition at line 87 of file itkTransformRigidityPenaltyTerm.h.

DerivativeType

template<class TFixedImage, class TScalarType>

typedef Superclass::DerivativeType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DerivativeType

Definition at line 118 of file itkTransformRigidityPenaltyTerm.h.

DerivativeValueType

template<class TFixedImage, class TScalarType>

typedef Superclass::DerivativeValueType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DerivativeValueType

Definition at line 119 of file itkTransformRigidityPenaltyTerm.h.

DilateFilterPointer

template<class TFixedImage, class TScalarType>

typedef DilateFilterType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DilateFilterPointer

Definition at line 183 of file itkTransformRigidityPenaltyTerm.h.

DilateFilterType

template<class TFixedImage, class TScalarType>

typedef GrayscaleDilateImageFilter< RigidityImageType, RigidityImageType, StructuringElementType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DilateFilterType

Definition at line 182 of file itkTransformRigidityPenaltyTerm.h.

FixedImageConstPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImageConstPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageConstPointer

Definition at line 97 of file itkTransformRigidityPenaltyTerm.h.

FixedImageMaskPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImageMaskPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageMaskPointer

Definition at line 114 of file itkTransformRigidityPenaltyTerm.h.

FixedImageMaskType

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImageMaskType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageMaskType

Definition at line 113 of file itkTransformRigidityPenaltyTerm.h.

FixedImagePixelType

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImagePixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImagePixelType

Definition at line 121 of file itkTransformRigidityPenaltyTerm.h.

FixedImagePointer

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImagePointer

Definition at line 96 of file itkTransformRigidityPenaltyTerm.h.

FixedImageRegionType

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImageRegionType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageRegionType

Definition at line 98 of file itkTransformRigidityPenaltyTerm.h.

FixedImageType

template<class TFixedImage, class TScalarType>

typedef Superclass::FixedImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageType

Definition at line 95 of file itkTransformRigidityPenaltyTerm.h.

GradientImageFilterPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::GradientImageFilterPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImageFilterPointer

Definition at line 112 of file itkTransformRigidityPenaltyTerm.h.

GradientImageFilterType

template<class TFixedImage, class TScalarType>

typedef Superclass::GradientImageFilterType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImageFilterType

Definition at line 111 of file itkTransformRigidityPenaltyTerm.h.

GradientImagePointer

template<class TFixedImage, class TScalarType>

typedef Superclass::GradientImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImagePointer

Definition at line 110 of file itkTransformRigidityPenaltyTerm.h.

GradientImageType

template<class TFixedImage, class TScalarType>

typedef Superclass::GradientImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImageType

Definition at line 109 of file itkTransformRigidityPenaltyTerm.h.

GradientPixelType

template<class TFixedImage, class TScalarType>

typedef Superclass::GradientPixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientPixelType

Definition at line 108 of file itkTransformRigidityPenaltyTerm.h.

GridSpacingType

template<class TFixedImage, class TScalarType>

typedef BSplineTransformType::SpacingType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GridSpacingType

Definition at line 153 of file itkTransformRigidityPenaltyTerm.h.

ImageSampleContainerPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::ImageSampleContainerPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ImageSampleContainerPointer

Definition at line 123 of file itkTransformRigidityPenaltyTerm.h.

ImageSampleContainerType

template<class TFixedImage, class TScalarType>

typedef Superclass::ImageSampleContainerType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ImageSampleContainerType

Definition at line 122 of file itkTransformRigidityPenaltyTerm.h.

InputPointType

template<class TFixedImage, class TScalarType>

typedef Superclass::InputPointType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InputPointType

Definition at line 101 of file itkTransformRigidityPenaltyTerm.h.

InternalMatrixType

template<class TFixedImage, class TScalarType>

typedef Superclass::InternalMatrixType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InternalMatrixType

Definition at line 140 of file itkTransformRigidityPenaltyTerm.h.

InterpolatorPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::InterpolatorPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InterpolatorPointer

Definition at line 106 of file itkTransformRigidityPenaltyTerm.h.

InterpolatorType

template<class TFixedImage, class TScalarType>

typedef Superclass::InterpolatorType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InterpolatorType

Definition at line 105 of file itkTransformRigidityPenaltyTerm.h.

JacobianOfSpatialHessianType

template<class TFixedImage, class TScalarType>

typedef Superclass::JacobianOfSpatialHessianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::JacobianOfSpatialHessianType

Definition at line 139 of file itkTransformRigidityPenaltyTerm.h.

JacobianOfSpatialJacobianType

template<class TFixedImage, class TScalarType>

typedef Superclass::JacobianOfSpatialJacobianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::JacobianOfSpatialJacobianType

Definition at line 137 of file itkTransformRigidityPenaltyTerm.h.

MeasureType

template<class TFixedImage, class TScalarType>

typedef Superclass::MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MeasureType

Definition at line 117 of file itkTransformRigidityPenaltyTerm.h.

MovingImageConstPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::MovingImageConstPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageConstPointer

Definition at line 94 of file itkTransformRigidityPenaltyTerm.h.

MovingImageMaskPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::MovingImageMaskPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageMaskPointer

Definition at line 116 of file itkTransformRigidityPenaltyTerm.h.

MovingImageMaskType

template<class TFixedImage, class TScalarType>

typedef Superclass::MovingImageMaskType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageMaskType

Definition at line 115 of file itkTransformRigidityPenaltyTerm.h.

MovingImagePixelType

template<class TFixedImage, class TScalarType>

typedef Superclass::MovingImagePixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImagePixelType

Definition at line 92 of file itkTransformRigidityPenaltyTerm.h.

MovingImagePointer

template<class TFixedImage, class TScalarType>

typedef Superclass::MovingImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImagePointer

Definition at line 93 of file itkTransformRigidityPenaltyTerm.h.

MovingImageType

template<class TFixedImage, class TScalarType>

typedef Superclass::MovingImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageType

Definition at line 91 of file itkTransformRigidityPenaltyTerm.h.

NeighborhoodIteratorType

template<class TFixedImage, class TScalarType>

typedef NeighborhoodIterator< CoefficientImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NeighborhoodIteratorType

Definition at line 165 of file itkTransformRigidityPenaltyTerm.h.

NeighborhoodSizeType

template<class TFixedImage, class TScalarType>

typedef NeighborhoodType::SizeType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NeighborhoodSizeType

Definition at line 161 of file itkTransformRigidityPenaltyTerm.h.

NeighborhoodType

template<class TFixedImage, class TScalarType>

typedef Neighborhood< ScalarType, itkGetStaticConstMacro( FixedImageDimension ) > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NeighborhoodType

Typedef support for neighborhoods, filters, etc.

Definition at line 160 of file itkTransformRigidityPenaltyTerm.h.

NOIFType

template<class TFixedImage, class TScalarType>

typedef NeighborhoodOperatorImageFilter< CoefficientImageType, CoefficientImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NOIFType

Definition at line 164 of file itkTransformRigidityPenaltyTerm.h.

OutputPointType

template<class TFixedImage, class TScalarType>

typedef Superclass::OutputPointType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::OutputPointType

Definition at line 102 of file itkTransformRigidityPenaltyTerm.h.

ParametersType

template<class TFixedImage, class TScalarType>

typedef Superclass::ParametersType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ParametersType

Definition at line 120 of file itkTransformRigidityPenaltyTerm.h.

Pointer

template<class TFixedImage, class TScalarType>

typedef SmartPointer< Self > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Pointer

Definition at line 80 of file itkTransformRigidityPenaltyTerm.h.

RadiusType

template<class TFixedImage, class TScalarType>

typedef NeighborhoodIteratorType::RadiusType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RadiusType

Definition at line 166 of file itkTransformRigidityPenaltyTerm.h.

RealType

template<class TFixedImage, class TScalarType>

typedef Superclass::RealType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RealType

Definition at line 107 of file itkTransformRigidityPenaltyTerm.h.

RigidityImageIndexType

template<class TFixedImage, class TScalarType>

typedef RigidityImageType::IndexType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageIndexType

Definition at line 173 of file itkTransformRigidityPenaltyTerm.h.

RigidityImageIteratorType

template<class TFixedImage, class TScalarType>

typedef ImageRegionIterator< RigidityImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageIteratorType

Definition at line 175 of file itkTransformRigidityPenaltyTerm.h.

RigidityImagePointer

template<class TFixedImage, class TScalarType>

typedef RigidityImageType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImagePointer

Definition at line 170 of file itkTransformRigidityPenaltyTerm.h.

RigidityImagePointType

template<class TFixedImage, class TScalarType>

typedef RigidityImageType::PointType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImagePointType

Definition at line 174 of file itkTransformRigidityPenaltyTerm.h.

RigidityImageRegionType

template<class TFixedImage, class TScalarType>

typedef RigidityImageType::RegionType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageRegionType

Definition at line 172 of file itkTransformRigidityPenaltyTerm.h.

RigidityImageType

template<class TFixedImage, class TScalarType>

typedef CoefficientImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageType

Typedef's for the construction of the rigidity image.

Definition at line 169 of file itkTransformRigidityPenaltyTerm.h.

RigidityPixelType

template<class TFixedImage, class TScalarType>

typedef RigidityImageType::PixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityPixelType

Definition at line 171 of file itkTransformRigidityPenaltyTerm.h.

ScalarType

template<class TFixedImage, class TScalarType>

typedef Superclass::ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ScalarType

Definition at line 124 of file itkTransformRigidityPenaltyTerm.h.

Self

template<class TFixedImage, class TScalarType>

typedef TransformRigidityPenaltyTerm itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Self

Standard itk stuff.

Definition at line 77 of file itkTransformRigidityPenaltyTerm.h.

SERadiusType

template<class TFixedImage, class TScalarType>

typedef StructuringElementType::RadiusType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SERadiusType

Definition at line 179 of file itkTransformRigidityPenaltyTerm.h.

SpatialHessianType

template<class TFixedImage, class TScalarType>

typedef Superclass::SpatialHessianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SpatialHessianType

Definition at line 138 of file itkTransformRigidityPenaltyTerm.h.

SpatialJacobianType

template<class TFixedImage, class TScalarType>

typedef Superclass::SpatialJacobianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SpatialJacobianType

Typedefs from the AdvancedTransform.

Definition at line 136 of file itkTransformRigidityPenaltyTerm.h.

StructuringElementType

template<class TFixedImage, class TScalarType>

typedef BinaryBallStructuringElement< RigidityPixelType, itkGetStaticConstMacro( FixedImageDimension ) > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::StructuringElementType

Definition at line 178 of file itkTransformRigidityPenaltyTerm.h.

Superclass

template<class TFixedImage, class TScalarType>

typedef TransformPenaltyTerm< TFixedImage, TScalarType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Superclass

Definition at line 79 of file itkTransformRigidityPenaltyTerm.h.

TransformJacobianType

template<class TFixedImage, class TScalarType>

typedef Superclass::TransformJacobianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformJacobianType

Definition at line 104 of file itkTransformRigidityPenaltyTerm.h.

TransformParametersType

template<class TFixedImage, class TScalarType>

typedef Superclass::TransformParametersType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformParametersType

Definition at line 103 of file itkTransformRigidityPenaltyTerm.h.

TransformPointer

template<class TFixedImage, class TScalarType>

typedef Superclass::TransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformPointer

Definition at line 100 of file itkTransformRigidityPenaltyTerm.h.

TransformType

template<class TFixedImage, class TScalarType>

typedef Superclass::TransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformType

Definition at line 99 of file itkTransformRigidityPenaltyTerm.h.

Constructor & Destructor Documentation

TransformRigidityPenaltyTerm() [1/2]

template<class TFixedImage, class TScalarType>

itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformRigidityPenaltyTerm ( )

protected

The constructor.

~TransformRigidityPenaltyTerm()

template<class TFixedImage, class TScalarType>

virtual itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::~TransformRigidityPenaltyTerm ( )

inlineprotectedvirtual

The destructor.

Definition at line 302 of file itkTransformRigidityPenaltyTerm.h.

TransformRigidityPenaltyTerm() [2/2]

template<class TFixedImage, class TScalarType>

itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformRigidityPenaltyTerm ( const Self &  )

private

The private constructor.

Member Function Documentation

BeforeThreadedGetValueAndDerivative()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BeforeThreadedGetValueAndDerivative ( const TransformParametersType &  parameters ) const

virtual

Contains calls from GetValueAndDerivative that are thread-unsafe.

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >.

CheckUseAndCalculationBooleans()

template<class TFixedImage, class TScalarType>

void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CheckUseAndCalculationBooleans

(

void

)

Check stuff.

Create1DOperator()

template<class TFixedImage, class TScalarType>

void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Create1DOperator ( NeighborhoodType &  F, const std::string &  whichF, const unsigned int  WhichDimension, const CoefficientImageSpacingType &  spacing  ) const

private

Private function used for the filtering. It creates 1D separable operators F.

CreateNDOperator()

template<class TFixedImage, class TScalarType>

void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CreateNDOperator ( NeighborhoodType &  F, const std::string &  whichF, const CoefficientImageSpacingType &  spacing  ) const

private

Private function used for the filtering. It creates ND inseparable operators F.

DilateRigidityImages()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DilateRigidityImages ( void  )

privatevirtual

Internal function to dilate the rigidity images.

FillRigidityCoefficientImage()

template<class TFixedImage, class TScalarType>

void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FillRigidityCoefficientImage

(

const ParametersType &

parameters

)

const

Function to fill the RigidityCoefficientImage every iteration.

FilterSeparable()

template<class TFixedImage, class TScalarType>

CoefficientImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FilterSeparable ( const CoefficientImageType *  , const std::vector< NeighborhoodType > &  Operators  ) const

private

Private function used for the filtering. It performs 1D separable filtering.

GetClassName()

template<class TFixedImage, class TScalarType>

virtual const char* itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::TransformPenaltyTerm< TFixedImage, TScalarType >.

Reimplemented in elastix::TransformRigidityPenalty< TElastix >.

GetDerivative()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetDerivative ( const ParametersType &  parameters, DerivativeType &  derivative  ) const

virtual

The GetDerivative()-method returns the rigid penalty derivative.

GetLinearityConditionGradientMagnitude()

template<class TFixedImage, class TScalarType>

virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetLinearityConditionGradientMagnitude ( )

virtual

Get the gradient magnitude of the linearity condition.

GetLinearityConditionValue()

template<class TFixedImage, class TScalarType>

virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetLinearityConditionValue ( )

virtual

Get the value of the linearity condition.

GetLinearityConditionWeight()

template<class TFixedImage, class TScalarType>

virtual ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetLinearityConditionWeight ( )

virtual

GetOrthonormalityConditionGradientMagnitude()

template<class TFixedImage, class TScalarType>

virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetOrthonormalityConditionGradientMagnitude ( )

virtual

Get the gradient magnitude of the orthonormality condition.

GetOrthonormalityConditionValue()

template<class TFixedImage, class TScalarType>

virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetOrthonormalityConditionValue ( )

virtual

Get the value of the orthonormality condition.

GetOrthonormalityConditionWeight()

template<class TFixedImage, class TScalarType>

virtual ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetOrthonormalityConditionWeight ( )

virtual

GetPropernessConditionGradientMagnitude()

template<class TFixedImage, class TScalarType>

virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetPropernessConditionGradientMagnitude ( )

virtual

Get the gradient magnitude of the properness condition.

GetPropernessConditionValue()

template<class TFixedImage, class TScalarType>

virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetPropernessConditionValue ( )

virtual

Get the value of the properness condition.

GetPropernessConditionWeight()

template<class TFixedImage, class TScalarType>

virtual ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetPropernessConditionWeight ( )

virtual

GetValue()

template<class TFixedImage, class TScalarType>

virtual MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetValue ( const ParametersType &  parameters ) const

virtual

The GetValue()-method returns the rigid penalty value.

GetValueAndDerivative()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetValueAndDerivative ( const ParametersType &  parameters, MeasureType &  value, DerivativeType &  derivative  ) const

virtual

The GetValueAndDerivative()-method returns the rigid penalty value and its derivative.

Initialize()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Initialize ( void  ) throw ( ExceptionObject )

virtual

Initialize the penalty term.

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >.

Reimplemented in elastix::TransformRigidityPenalty< TElastix >.

itkStaticConstMacro() [1/3]

template<class TFixedImage, class TScalarType>

itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned	int,
		FixedImageType::ImageDimension
	)

Define the dimension.

itkStaticConstMacro() [2/3]

template<class TFixedImage, class TScalarType>

itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned	int,
		FixedImageType::ImageDimension
	)

itkStaticConstMacro() [3/3]

template<class TFixedImage, class TScalarType>

itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro	(	ImageDimension	,
		unsigned	int,
		FixedImageType::ImageDimension
	)

New()

template<class TFixedImage, class TScalarType>

static Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::New ( )

static

Method for creation through the object factory.

operator=()

template<class TFixedImage, class TScalarType>

void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::operator= ( const Self &  )

private

The private copy constructor.

PrintSelf()

template<class TFixedImage, class TScalarType>

void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protected

PrintSelf.

SetBSplineTransform()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetBSplineTransform ( BSplineTransformType *  _arg )

virtual

Set the B-spline transform in this class. This class expects a BSplineTransform! It is not suited for others.

SetCalculateLinearityCondition()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetCalculateLinearityCondition ( bool  _arg )

virtual

Set the calculation of the linearity condition part, even if we don't use it.

SetCalculateOrthonormalityCondition()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetCalculateOrthonormalityCondition ( bool  _arg )

virtual

Set the calculation of the orthonormality condition part, even if we don't use it.

SetCalculatePropernessCondition()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetCalculatePropernessCondition ( bool  _arg )

virtual

Set the calculation of the properness condition part., even if we don't use it.

SetDilateRigidityImages()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetDilateRigidityImages ( bool  _arg )

virtual

Get the value of the total rigidity penalty term. Set if the RigidityImage's are dilated.

SetDilationRadiusMultiplier()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetDilationRadiusMultiplier ( CoordinateRepresentationType  _arg )

virtual

Set the DilationRadiusMultiplier.

SetFixedRigidityImage()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetFixedRigidityImage ( RigidityImageType *  _arg )

virtual

Set the fixed coefficient image.

SetLinearityConditionWeight()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetLinearityConditionWeight ( ScalarType  _arg )

virtual

Set the RigidityImage in this class. Set/Get the weight of the linearity condition part.

SetMovingRigidityImage()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetMovingRigidityImage ( RigidityImageType *  _arg )

virtual

Set the moving coefficient image.

SetOrthonormalityConditionWeight()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetOrthonormalityConditionWeight ( ScalarType  _arg )

virtual

Set/Get the weight of the orthonormality condition part.

SetPropernessConditionWeight()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetPropernessConditionWeight ( ScalarType  _arg )

virtual

Set/Get the weight of the properness condition part.

SetUseFixedRigidityImage()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseFixedRigidityImage ( bool  _arg )

virtual

Set to use the FixedRigidityImage or not.

SetUseLinearityCondition()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseLinearityCondition ( bool  _arg )

virtual

Set the usage of the linearity condition part.

SetUseMovingRigidityImage()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseMovingRigidityImage ( bool  _arg )

virtual

Set to use the MovingRigidityImage or not.

SetUseOrthonormalityCondition()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseOrthonormalityCondition ( bool  _arg )

virtual

Set the usage of the orthonormality condition part.

SetUsePropernessCondition()

template<class TFixedImage, class TScalarType>

virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUsePropernessCondition ( bool  _arg )

virtual

Set the usage of the properness condition part.

Field Documentation

m_BSplineTransform

template<class TFixedImage, class TScalarType>

BSplineTransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_BSplineTransform

private

Member variables.

Definition at line 330 of file itkTransformRigidityPenaltyTerm.h.

m_CalculateLinearityCondition

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_CalculateLinearityCondition

private

Definition at line 346 of file itkTransformRigidityPenaltyTerm.h.

m_CalculateOrthonormalityCondition

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_CalculateOrthonormalityCondition

private

Definition at line 347 of file itkTransformRigidityPenaltyTerm.h.

m_CalculatePropernessCondition

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_CalculatePropernessCondition

private

Definition at line 348 of file itkTransformRigidityPenaltyTerm.h.

m_DilateRigidityImages

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_DilateRigidityImages

private

Definition at line 352 of file itkTransformRigidityPenaltyTerm.h.

m_DilationRadiusMultiplier

template<class TFixedImage, class TScalarType>

CoordinateRepresentationType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_DilationRadiusMultiplier

private

Rigidity image variables.

Definition at line 351 of file itkTransformRigidityPenaltyTerm.h.

m_FixedRigidityImage

template<class TFixedImage, class TScalarType>

RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_FixedRigidityImage

private

Definition at line 354 of file itkTransformRigidityPenaltyTerm.h.

m_FixedRigidityImageDilated

template<class TFixedImage, class TScalarType>

RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_FixedRigidityImageDilated

private

Definition at line 359 of file itkTransformRigidityPenaltyTerm.h.

m_FixedRigidityImageDilation

template<class TFixedImage, class TScalarType>

std::vector< DilateFilterPointer > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_FixedRigidityImageDilation

private

Definition at line 357 of file itkTransformRigidityPenaltyTerm.h.

m_LinearityConditionGradientMagnitude

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_LinearityConditionGradientMagnitude

mutableprivate

Definition at line 339 of file itkTransformRigidityPenaltyTerm.h.

m_LinearityConditionValue

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_LinearityConditionValue

mutableprivate

Definition at line 336 of file itkTransformRigidityPenaltyTerm.h.

m_LinearityConditionWeight

template<class TFixedImage, class TScalarType>

ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_LinearityConditionWeight

private

Definition at line 331 of file itkTransformRigidityPenaltyTerm.h.

m_MovingRigidityImage

template<class TFixedImage, class TScalarType>

RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_MovingRigidityImage

private

Definition at line 355 of file itkTransformRigidityPenaltyTerm.h.

m_MovingRigidityImageDilated

template<class TFixedImage, class TScalarType>

RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_MovingRigidityImageDilated

private

Definition at line 360 of file itkTransformRigidityPenaltyTerm.h.

m_MovingRigidityImageDilation

template<class TFixedImage, class TScalarType>

std::vector< DilateFilterPointer > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_MovingRigidityImageDilation

private

Definition at line 358 of file itkTransformRigidityPenaltyTerm.h.

m_OrthonormalityConditionGradientMagnitude

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_OrthonormalityConditionGradientMagnitude

mutableprivate

Definition at line 340 of file itkTransformRigidityPenaltyTerm.h.

m_OrthonormalityConditionValue

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_OrthonormalityConditionValue

mutableprivate

Definition at line 337 of file itkTransformRigidityPenaltyTerm.h.

m_OrthonormalityConditionWeight

template<class TFixedImage, class TScalarType>

ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_OrthonormalityConditionWeight

private

Definition at line 332 of file itkTransformRigidityPenaltyTerm.h.

m_PropernessConditionGradientMagnitude

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_PropernessConditionGradientMagnitude

mutableprivate

Definition at line 341 of file itkTransformRigidityPenaltyTerm.h.

m_PropernessConditionValue

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_PropernessConditionValue

mutableprivate

Definition at line 338 of file itkTransformRigidityPenaltyTerm.h.

m_PropernessConditionWeight

template<class TFixedImage, class TScalarType>

ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_PropernessConditionWeight

private

Definition at line 333 of file itkTransformRigidityPenaltyTerm.h.

m_RigidityCoefficientImage

template<class TFixedImage, class TScalarType>

RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_RigidityCoefficientImage

private

Definition at line 356 of file itkTransformRigidityPenaltyTerm.h.

m_RigidityCoefficientImageIsFilled

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_RigidityCoefficientImageIsFilled

mutableprivate

Definition at line 353 of file itkTransformRigidityPenaltyTerm.h.

m_RigidityPenaltyTermValue

template<class TFixedImage, class TScalarType>

MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_RigidityPenaltyTermValue

mutableprivate

Definition at line 335 of file itkTransformRigidityPenaltyTerm.h.

m_UseFixedRigidityImage

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseFixedRigidityImage

private

Definition at line 361 of file itkTransformRigidityPenaltyTerm.h.

m_UseLinearityCondition

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseLinearityCondition

private

Definition at line 343 of file itkTransformRigidityPenaltyTerm.h.

m_UseMovingRigidityImage

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseMovingRigidityImage

private

Definition at line 362 of file itkTransformRigidityPenaltyTerm.h.

m_UseOrthonormalityCondition

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseOrthonormalityCondition

private

Definition at line 344 of file itkTransformRigidityPenaltyTerm.h.

m_UsePropernessCondition

template<class TFixedImage, class TScalarType>

bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UsePropernessCondition

private

Definition at line 345 of file itkTransformRigidityPenaltyTerm.h.