#include <itkParzenWindowNormalizedMutualInformationImageToImageMetric.h>

Detailed Description

template<class TFixedImage, class TMovingImage>
class itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >

Computes the normalized mutual information between two images to be registered using a method based on Thevenaz&Unser [3].

ParzenWindowNormalizedMutualInformationImageToImageMetric computes the normalized mutual information between a fixed and moving image to be registered. The calculations are based on the method of Mattes et al [1,2] and Thevenaz&Unser [3], where the probability density distribution are estimated using Parzen histograms. The expression for the derivative is derived following [3].

Construction of the PDFs is implemented in the superclass ParzenWindowHistogramImageToImageMetric.

This implementation of the NormalizedMutualInformation is based on the AdvancedImageToImageMetric, which means that:

It uses the ImageSampler-framework
It makes use of the compact support of B-splines, in case of B-spline transforms.
Image derivatives are computed using either the B-spline interpolator's implementation or by nearest neighbor interpolation of a precomputed central difference image.
A minimum number of samples that should map within the moving image (mask) can be specified.

Notes:

This class returns the negative normalized mutual information value.
This class in not thread safe due the private data structures used to the store the marginal and joint pdfs.

References:
[1] "Nonrigid multimodality image registration"
D. Mattes, D. R. Haynor, H. Vesselle, T. Lewellen and W. Eubank
Medical Imaging 2001: Image Processing, 2001, pp. 1609-1620.
[2] "PET-CT Image Registration in the Chest Using Free-form Deformations"
D. Mattes, D. R. Haynor, H. Vesselle, T. Lewellen and W. Eubank
IEEE Transactions in Medical Imaging. To Appear.
[3] "Optimization of Mutual Information for MultiResolution Image Registration"
P. Thevenaz and M. Unser
IEEE Transactions in Image Processing, 9(12) December 2000.

See also: ParzenWindowHistogramImageToImageMetric

Definition at line 72 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

Inheritance diagram for itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >:

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType

typedef Superclass::DerivativeType	DerivativeType

typedef Superclass::FixedImageConstPointer	FixedImageConstPointer

typedef Superclass::FixedImageLimiterOutputType	FixedImageLimiterOutputType

typedef Superclass::FixedImageLimiterType	FixedImageLimiterType

typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer

typedef Superclass::FixedImageMaskType	FixedImageMaskType

typedef Superclass::FixedImagePixelType	FixedImagePixelType

typedef Superclass::FixedImageRegionType	FixedImageRegionType

typedef Superclass::FixedImageType	FixedImageType

typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer

typedef Superclass::GradientImageFilterType	GradientImageFilterType

typedef Superclass::GradientImagePointer	GradientImagePointer

typedef Superclass::GradientImageType	GradientImageType

typedef Superclass::GradientPixelType	GradientPixelType

typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer

typedef Superclass::ImageSampleContainerType	ImageSampleContainerType

typedef Superclass::ImageSamplerPointer	ImageSamplerPointer

typedef Superclass::ImageSamplerType	ImageSamplerType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InterpolatorPointer	InterpolatorPointer

typedef Superclass::InterpolatorType	InterpolatorType

typedef Superclass::MeasureType	MeasureType

typedef Superclass::MovingImageConstPointer	MovingImageConstPointer

typedef Superclass::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType

typedef Superclass::MovingImageLimiterOutputType	MovingImageLimiterOutputType

typedef Superclass::MovingImageLimiterType	MovingImageLimiterType

typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer

typedef Superclass::MovingImageMaskType	MovingImageMaskType

typedef Superclass::MovingImagePixelType	MovingImagePixelType

typedef Superclass::MovingImageRegionType	MovingImageRegionType

typedef Superclass::MovingImageType	MovingImageType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::ParametersType	ParametersType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef ParzenWindowNormalizedMutualInformationImageToImageMetric	Self

typedef ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >	Superclass

typedef Superclass::TransformJacobianType	TransformJacobianType

typedef Superclass::TransformParametersType	TransformParametersType

typedef Superclass::TransformPointer	TransformPointer

typedef Superclass::TransformType	TransformType

Public Types inherited from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType

typedef Superclass::DerivativeType	DerivativeType

typedef Superclass::DerivativeValueType	DerivativeValueType

typedef Superclass::FixedImageConstPointer	FixedImageConstPointer

typedef Superclass::FixedImageLimiterOutputType	FixedImageLimiterOutputType

typedef Superclass::FixedImageLimiterType	FixedImageLimiterType

typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer

typedef Superclass::FixedImageMaskType	FixedImageMaskType

typedef Superclass::FixedImagePixelType	FixedImagePixelType

typedef Superclass::FixedImageRegionType	FixedImageRegionType

typedef Superclass::FixedImageType	FixedImageType

typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer

typedef Superclass::GradientImageFilterType	GradientImageFilterType

typedef Superclass::GradientImagePointer	GradientImagePointer

typedef Superclass::GradientImageType	GradientImageType

typedef Superclass::GradientPixelType	GradientPixelType

typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer

typedef Superclass::ImageSampleContainerType	ImageSampleContainerType

typedef Superclass::ImageSamplerPointer	ImageSamplerPointer

typedef Superclass::ImageSamplerType	ImageSamplerType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InterpolatorPointer	InterpolatorPointer

typedef Superclass::InterpolatorType	InterpolatorType

typedef Superclass::MeasureType	MeasureType

typedef Superclass::MovingImageConstPointer	MovingImageConstPointer

typedef Superclass::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType

typedef Superclass::MovingImageLimiterOutputType	MovingImageLimiterOutputType

typedef Superclass::MovingImageLimiterType	MovingImageLimiterType

typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer

typedef Superclass::MovingImageMaskType	MovingImageMaskType

typedef Superclass::MovingImagePixelType	MovingImagePixelType

typedef Superclass::MovingImageRegionType	MovingImageRegionType

typedef Superclass::MovingImageType	MovingImageType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::ParametersType	ParametersType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef ParzenWindowHistogramImageToImageMetric	Self

typedef AdvancedImageToImageMetric< TFixedImage, TMovingImage >	Superclass

typedef Superclass::ThreaderType	ThreaderType

typedef Superclass::ThreadInfoType	ThreadInfoType

typedef Superclass::TransformJacobianType	TransformJacobianType

typedef Superclass::TransformParametersType	TransformParametersType

typedef Superclass::TransformPointer	TransformPointer

typedef Superclass::TransformType	TransformType

Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType

typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer

typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType

typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer

typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType

typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer

typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType

typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType

typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType

typedef Superclass::DerivativeType	DerivativeType

typedef DerivativeType::ValueType	DerivativeValueType

typedef Superclass::FixedImageConstPointer	FixedImageConstPointer

typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType

typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer

typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType

typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer

typedef Superclass::FixedImageMaskType	FixedImageMaskType

typedef FixedImageType::PixelType	FixedImagePixelType

typedef FixedImageType::Pointer	FixedImagePointer

typedef Superclass::FixedImageRegionType	FixedImageRegionType

typedef Superclass::FixedImageType	FixedImageType

typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer

typedef Superclass::GradientImageFilterType	GradientImageFilterType

typedef Superclass::GradientImagePointer	GradientImagePointer

typedef Superclass::GradientImageType	GradientImageType

typedef Superclass::GradientPixelType	GradientPixelType

typedef vnl_sparse_matrix< HessianValueType >	HessianType

typedef DerivativeType::ValueType	HessianValueType

typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer

typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType

typedef ImageSamplerType::Pointer	ImageSamplerPointer

typedef ImageSamplerBase< FixedImageType >	ImageSamplerType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InterpolatorPointer	InterpolatorPointer

typedef Superclass::InterpolatorType	InterpolatorType

typedef Superclass::MeasureType	MeasureType

typedef Superclass::MovingImageConstPointer	MovingImageConstPointer

typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType

typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType

typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer

typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType

typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer

typedef Superclass::MovingImageMaskType	MovingImageMaskType

typedef Superclass::MovingImagePixelType	MovingImagePixelType

typedef MovingImageType::Pointer	MovingImagePointer

typedef MovingImageType::RegionType	MovingImageRegionType

typedef Superclass::MovingImageType	MovingImageType

typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::ParametersType	ParametersType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef TransformType::ScalarType	ScalarType

typedef AdvancedImageToImageMetric	Self

typedef ImageToImageMetric< TFixedImage, TMovingImage >	Superclass

typedef itk::MultiThreader	ThreaderType

typedef ThreaderType::ThreadInfoStruct	ThreadInfoType

typedef Superclass::TransformJacobianType	TransformJacobianType

typedef Superclass::TransformParametersType	TransformParametersType

typedef Superclass::TransformPointer	TransformPointer

typedef Superclass::TransformType	TransformType

Public Member Functions
virtual const char *	GetClassName () const

MeasureType	GetValue (const ParametersType &parameters) const

void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

Public Member Functions inherited from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >
void	GetDerivative (const ParametersType &parameters, DerivativeType &Derivative) const

virtual double	GetFiniteDifferencePerturbation () const

virtual unsigned int	GetFixedKernelBSplineOrder () const

virtual unsigned int	GetMovingKernelBSplineOrder () const

virtual unsigned long	GetNumberOfFixedHistogramBins ()

virtual unsigned long	GetNumberOfMovingHistogramBins ()

virtual bool	GetUseDerivative () const

virtual const bool &	GetUseExplicitPDFDerivatives ()

virtual bool	GetUseFiniteDifferenceDerivative () const

void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

void	Initialize (void) throw ( ExceptionObject )

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

virtual void	SetFiniteDifferencePerturbation (double _arg)

virtual void	SetFixedKernelBSplineOrder (unsigned int _arg)

virtual void	SetMovingKernelBSplineOrder (unsigned int _arg)

virtual void	SetNumberOfFixedHistogramBins (unsigned long _arg)

virtual void	SetNumberOfMovingHistogramBins (unsigned long _arg)

virtual void	SetUseDerivative (bool _arg)

virtual void	SetUseExplicitPDFDerivatives (bool _arg)

virtual void	SetUseFiniteDifferenceDerivative (bool _arg)

virtual void	UseExplicitPDFDerivativesOff ()

virtual void	UseExplicitPDFDerivativesOn ()

Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const

virtual const FixedImageLimiterType *	GetFixedImageLimiter ()

virtual double	GetFixedLimitRangeRatio () const

virtual ImageSamplerType *	GetImageSampler (void) const

virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()

virtual const MovingImageLimiterType *	GetMovingImageLimiter ()

virtual double	GetMovingLimitRangeRatio () const

virtual double	GetRequiredRatioOfValidSamples () const

virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const

virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const

const AdvancedTransformType *	GetTransform (void) const ITK_OVERRIDE

virtual bool	GetUseFixedImageLimiter () const

virtual bool	GetUseImageSampler () const

virtual const bool &	GetUseMetricSingleThreaded ()

virtual bool	GetUseMovingImageDerivativeScales () const

virtual bool	GetUseMovingImageLimiter () const

virtual const bool &	GetUseMultiThread ()

	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)

	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)

virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)

virtual void	SetFixedLimitRangeRatio (double _arg)

virtual void	SetImageSampler (ImageSamplerType *_arg)

virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)

virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)

virtual void	SetMovingLimitRangeRatio (double _arg)

virtual void	SetNumberOfThreads (ThreadIdType numberOfThreads)

virtual void	SetRequiredRatioOfValidSamples (double _arg)

virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)

virtual void	SetTransform (AdvancedTransformType *arg)

virtual void	SetUseMetricSingleThreaded (bool _arg)

virtual void	SetUseMovingImageDerivativeScales (bool _arg)

virtual void	SetUseMultiThread (bool _arg)

virtual void	UseMetricSingleThreadedOff ()

virtual void	UseMetricSingleThreadedOn ()

virtual void	UseMultiThreadOff ()

virtual void	UseMultiThreadOn ()

Static Public Member Functions
static Pointer	New ()

Protected Types
typedef Superclass::BSplineInterpolatorType	BSplineInterpolatorType

typedef Superclass::CentralDifferenceGradientFilterType	CentralDifferenceGradientFilterType

typedef Superclass::FixedImageIndexType	FixedImageIndexType

typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType

typedef Superclass::FixedImagePointType	FixedImagePointType

typedef Superclass::IncrementalMarginalPDFType	IncrementalMarginalPDFType

typedef Superclass::JointPDFDerivativesIndexType	JointPDFDerivativesIndexType

typedef Superclass::JointPDFDerivativesRegionType	JointPDFDerivativesRegionType

typedef Superclass::JointPDFDerivativesSizeType	JointPDFDerivativesSizeType

typedef Superclass::JointPDFDerivativesType	JointPDFDerivativesType

typedef Superclass::JointPDFIndexType	JointPDFIndexType

typedef Superclass::JointPDFRegionType	JointPDFRegionType

typedef Superclass::JointPDFSizeType	JointPDFSizeType

typedef Superclass::JointPDFType	JointPDFType

typedef Superclass::KernelFunctionType	KernelFunctionType

typedef Superclass::MarginalPDFType	MarginalPDFType

typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType

typedef Superclass::MovingImageDerivativeType	MovingImageDerivativeType

typedef Superclass::MovingImageIndexType	MovingImageIndexType

typedef Superclass::MovingImagePointType	MovingImagePointType

typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType

typedef Superclass::ParzenValueContainerType	ParzenValueContainerType

typedef Superclass::PDFValueType	PDFValueType

Protected Types inherited from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >
typedef Superclass::BSplineInterpolatorType	BSplineInterpolatorType

typedef Superclass::CentralDifferenceGradientFilterType	CentralDifferenceGradientFilterType

typedef Superclass::FixedImageIndexType	FixedImageIndexType

typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType

typedef Superclass::FixedImagePointType	FixedImagePointType

typedef IncrementalMarginalPDFType::IndexType	IncrementalMarginalPDFIndexType

typedef IncrementalMarginalPDFType::Pointer	IncrementalMarginalPDFPointer

typedef IncrementalMarginalPDFType::RegionType	IncrementalMarginalPDFRegionType

typedef IncrementalMarginalPDFType::SizeType	IncrementalMarginalPDFSizeType

typedef Image< PDFValueType, 2 >	IncrementalMarginalPDFType

typedef JointPDFDerivativesType::IndexType	JointPDFDerivativesIndexType

typedef JointPDFDerivativesType::Pointer	JointPDFDerivativesPointer

typedef JointPDFDerivativesType::RegionType	JointPDFDerivativesRegionType

typedef JointPDFDerivativesType::SizeType	JointPDFDerivativesSizeType

typedef Image< PDFDerivativeValueType, 3 >	JointPDFDerivativesType

typedef JointPDFType::IndexType	JointPDFIndexType

typedef JointPDFType::Pointer	JointPDFPointer

typedef JointPDFType::RegionType	JointPDFRegionType

typedef JointPDFType::SizeType	JointPDFSizeType

typedef Image< PDFValueType, 2 >	JointPDFType

typedef KernelFunctionType::Pointer	KernelFunctionPointer

typedef KernelFunctionBase2< PDFValueType >	KernelFunctionType

typedef Array< PDFValueType >	MarginalPDFType

typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType

typedef Superclass::MovingImageDerivativeType	MovingImageDerivativeType

typedef Superclass::MovingImageIndexType	MovingImageIndexType

typedef Superclass::MovingImagePointType	MovingImagePointType

typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType

typedef FixedImageType::OffsetValueType	OffsetValueType

typedef Array< PDFValueType >	ParzenValueContainerType

typedef float	PDFDerivativeValueType

typedef double	PDFValueType

Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer

typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType

typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer

typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType

typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer

typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType

typedef FixedImageType::IndexType	FixedImageIndexType

typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType

typedef TransformType::InputPointType	FixedImagePointType

typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer

typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType

typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType

typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType

typedef MovingImageType::IndexType	MovingImageIndexType

typedef TransformType::OutputPointType	MovingImagePointType

typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType

typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer

typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType

Protected Member Functions
virtual void	ComputeLogMarginalPDF (MarginalPDFType &pdf) const

virtual MeasureType	ComputeNormalizedMutualInformation (MeasureType &jointEntropy) const

	ParzenWindowNormalizedMutualInformationImageToImageMetric ()

void	PrintSelf (std::ostream &os, Indent indent) const

virtual	~ParzenWindowNormalizedMutualInformationImageToImageMetric ()

Protected Member Functions inherited from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >
void	AfterThreadedComputePDFs (void) const

virtual void	ComputeIncrementalMarginalPDFs (const JointPDFDerivativesType incrementalPDF, IncrementalMarginalPDFType fixedIncrementalMarginalPDF, IncrementalMarginalPDFType *movingIncrementalMarginalPDF) const

virtual void	ComputeMarginalPDF (const JointPDFType *jointPDF, MarginalPDFType &marginalPDF, const unsigned int &direction) const

virtual void	ComputePDFs (const ParametersType &parameters) const

virtual void	ComputePDFsAndIncrementalPDFs (const ParametersType &parameters) const

virtual void	ComputePDFsAndPDFDerivatives (const ParametersType &parameters) const

virtual void	ComputePDFsSingleThreaded (const ParametersType &parameters) const

void	EvaluateParzenValues (double parzenWindowTerm, OffsetValueType parzenWindowIndex, const KernelFunctionType *kernel, ParzenValueContainerType &parzenValues) const

virtual void	GetValueAndAnalyticDerivative (const ParametersType &, MeasureType &, DerivativeType &) const

virtual void	GetValueAndFiniteDifferenceDerivative (const ParametersType &, MeasureType &, DerivativeType &) const

virtual void	InitializeHistograms (void)

virtual void	InitializeKernels (void)

virtual void	InitializeThreadingParameters (void) const

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedParzenWindowHistogramGetValueAndDerivativePerThreadStruct, AlignedParzenWindowHistogramGetValueAndDerivativePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, ParzenWindowHistogramGetValueAndDerivativePerThreadStruct, PaddedParzenWindowHistogramGetValueAndDerivativePerThreadStruct)

void	LaunchComputePDFsThreaderCallback (void) const

virtual void	NormalizeJointPDF (JointPDFType *pdf, const double &factor) const

virtual void	NormalizeJointPDFDerivatives (JointPDFDerivativesType *pdf, const double &factor) const

	ParzenWindowHistogramImageToImageMetric ()

void	PrintSelf (std::ostream &os, Indent indent) const

void	ThreadedComputePDFs (ThreadIdType threadId)

virtual void	UpdateJointPDFAndDerivatives (const RealType &fixedImageValue, const RealType &movingImageValue, const DerivativeType imageJacobian, const NonZeroJacobianIndicesType nzji, JointPDFType *jointPDF) const

virtual void	UpdateJointPDFAndIncrementalPDFs (RealType fixedImageValue, RealType movingImageValue, RealType movingMaskValue, const DerivativeType &movingImageValuesRight, const DerivativeType &movingImageValuesLeft, const DerivativeType &movingMaskValuesRight, const DerivativeType &movingMaskValuesLeft, const NonZeroJacobianIndicesType &nzji) const

void	UpdateJointPDFDerivatives (const JointPDFIndexType &pdfIndex, double factor, const DerivativeType &imageJacobian, const NonZeroJacobianIndicesType &nzji) const

virtual	~ParzenWindowHistogramImageToImageMetric ()

Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
	AdvancedImageToImageMetric ()

virtual void	AfterThreadedGetValue (MeasureType &value) const

virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const

virtual void	CheckForAdvancedTransform (void)

virtual void	CheckForBSplineInterpolator (void)

virtual void	CheckForBSplineTransform (void) const

virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const

virtual void	ComputeFixedImageExtrema (const FixedImageType *image, const FixedImageRegionType &region)

virtual void	ComputeMovingImageExtrema (const MovingImageType *image, const MovingImageRegionType &region)

virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const

virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const

virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const

virtual void	InitializeImageSampler (void) throw ( ExceptionObject )

virtual void	InitializeLimiters (void)

virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)

void	LaunchGetValueAndDerivativeThreaderCallback (void) const

void	LaunchGetValueThreaderCallback (void) const

void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	SetUseFixedImageLimiter (bool _arg)

virtual void	SetUseImageSampler (bool _arg)

virtual void	SetUseMovingImageLimiter (bool _arg)

virtual void	ThreadedGetValue (ThreadIdType threadID)

virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)

virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const

virtual	~AdvancedImageToImageMetric ()

Private Member Functions
void	operator= (const Self &)

	ParzenWindowNormalizedMutualInformationImageToImageMetric (const Self &)

Additional Inherited Members
Static Protected Member Functions inherited from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >
static ITK_THREAD_RETURN_TYPE	ComputePDFsThreaderCallback (void *arg)

Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
static ITK_THREAD_RETURN_TYPE	AccumulateDerivativesThreaderCallback (void *arg)

static ITK_THREAD_RETURN_TYPE	GetValueAndDerivativeThreaderCallback (void *arg)

static ITK_THREAD_RETURN_TYPE	GetValueThreaderCallback (void *arg)

Protected Attributes inherited from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >
double	m_Alpha

KernelFunctionPointer	m_DerivativeMovingKernel

double	m_FixedImageBinSize

MarginalPDFType	m_FixedImageMarginalPDF

double	m_FixedImageNormalizedMin

IncrementalMarginalPDFPointer	m_FixedIncrementalMarginalPDFLeft

IncrementalMarginalPDFPointer	m_FixedIncrementalMarginalPDFRight

KernelFunctionPointer	m_FixedKernel

double	m_FixedParzenTermToIndexOffset

JointPDFDerivativesPointer	m_IncrementalJointPDFLeft

JointPDFDerivativesPointer	m_IncrementalJointPDFRight

JointPDFPointer	m_JointPDF

JointPDFDerivativesPointer	m_JointPDFDerivatives

JointPDFRegionType	m_JointPDFWindow

double	m_MovingImageBinSize

MarginalPDFType	m_MovingImageMarginalPDF

double	m_MovingImageNormalizedMin

IncrementalMarginalPDFPointer	m_MovingIncrementalMarginalPDFLeft

IncrementalMarginalPDFPointer	m_MovingIncrementalMarginalPDFRight

KernelFunctionPointer	m_MovingKernel

double	m_MovingParzenTermToIndexOffset

AlignedParzenWindowHistogramGetValueAndDerivativePerThreadStruct *	m_ParzenWindowHistogramGetValueAndDerivativePerThreadVariables

ThreadIdType	m_ParzenWindowHistogramGetValueAndDerivativePerThreadVariablesSize

ParzenWindowHistogramMultiThreaderParameterType	m_ParzenWindowHistogramThreaderParameters

DerivativeType	m_PerturbedAlphaLeft

DerivativeType	m_PerturbedAlphaRight

std::vector< JointPDFPointer >	m_ThreaderJointPDFs

Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
AdvancedTransformType::Pointer	m_AdvancedTransform

BSplineInterpolatorPointer	m_BSplineInterpolator

BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat

CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter

FixedImageLimiterPointer	m_FixedImageLimiter

FixedImageLimiterOutputType	m_FixedImageMaxLimit

FixedImageLimiterOutputType	m_FixedImageMinLimit

FixedImagePixelType	m_FixedImageTrueMax

FixedImagePixelType	m_FixedImageTrueMin

AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables

ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize

AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables

ThreadIdType	m_GetValuePerThreadVariablesSize

ImageSamplerPointer	m_ImageSampler

bool	m_InterpolatorIsBSpline

bool	m_InterpolatorIsBSplineFloat

bool	m_InterpolatorIsLinear

bool	m_InterpolatorIsReducedBSpline

LinearInterpolatorPointer	m_LinearInterpolator

MovingImageLimiterPointer	m_MovingImageLimiter

MovingImageLimiterOutputType	m_MovingImageMaxLimit

MovingImageLimiterOutputType	m_MovingImageMinLimit

MovingImagePixelType	m_MovingImageTrueMax

MovingImagePixelType	m_MovingImageTrueMin

ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator

MultiThreaderParameterType	m_ThreaderMetricParameters

bool	m_TransformIsAdvanced

bool	m_TransformIsBSpline

bool	m_UseMetricSingleThreaded

bool	m_UseMultiThread

bool	m_UseOpenMP

Member Typedef Documentation

◆ BSplineInterpolatorType

template<class TFixedImage, class TMovingImage>

typedef Superclass::BSplineInterpolatorType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::BSplineInterpolatorType

protected

Definition at line 173 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ CentralDifferenceGradientFilterType

template<class TFixedImage, class TMovingImage>

typedef Superclass::CentralDifferenceGradientFilterType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::CentralDifferenceGradientFilterType

protected

Definition at line 174 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ConstPointer

template<class TFixedImage, class TMovingImage>

typedef SmartPointer< const Self > itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer

Definition at line 82 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ CoordinateRepresentationType

template<class TFixedImage, class TMovingImage>

typedef Superclass::CoordinateRepresentationType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::CoordinateRepresentationType

Typedefs from the superclass.

Definition at line 90 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ DerivativeType

template<class TFixedImage, class TMovingImage>

typedef Superclass::DerivativeType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType

Definition at line 120 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageConstPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageConstPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer

Definition at line 99 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageIndexType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageIndexType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageIndexType

protected

Protected Typedefs Typedefs inherited from superclass

Definition at line 167 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageIndexValueType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageIndexValueType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageIndexValueType

protected

Definition at line 168 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageLimiterOutputType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageLimiterOutputType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageLimiterOutputType

Definition at line 132 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageLimiterType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageLimiterType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageLimiterType

Definition at line 129 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageMaskPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageMaskPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageMaskPointer

Definition at line 116 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageMaskType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageMaskType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageMaskType

Definition at line 115 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImagePixelType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImagePixelType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImagePixelType

Definition at line 122 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImagePointType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImagePointType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImagePointType

protected

Definition at line 170 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageRegionType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageRegionType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageRegionType

Definition at line 100 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ FixedImageType

template<class TFixedImage, class TMovingImage>

typedef Superclass::FixedImageType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType

Definition at line 98 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ GradientImageFilterPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::GradientImageFilterPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GradientImageFilterPointer

Definition at line 114 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ GradientImageFilterType

template<class TFixedImage, class TMovingImage>

typedef Superclass::GradientImageFilterType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GradientImageFilterType

Definition at line 113 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ GradientImagePointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::GradientImagePointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GradientImagePointer

Definition at line 112 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ GradientImageType

template<class TFixedImage, class TMovingImage>

typedef Superclass::GradientImageType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GradientImageType

Definition at line 111 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ GradientPixelType

template<class TFixedImage, class TMovingImage>

typedef Superclass::GradientPixelType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType

Definition at line 110 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ImageSampleContainerPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::ImageSampleContainerPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ImageSampleContainerPointer

Definition at line 128 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ImageSampleContainerType

template<class TFixedImage, class TMovingImage>

typedef Superclass::ImageSampleContainerType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ImageSampleContainerType

Definition at line 126 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ImageSamplerPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::ImageSamplerPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ImageSamplerPointer

Definition at line 125 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ImageSamplerType

template<class TFixedImage, class TMovingImage>

typedef Superclass::ImageSamplerType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ImageSamplerType

Definition at line 124 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ IncrementalMarginalPDFType

template<class TFixedImage, class TMovingImage>

typedef Superclass::IncrementalMarginalPDFType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::IncrementalMarginalPDFType

protected

Definition at line 180 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ InputPointType

template<class TFixedImage, class TMovingImage>

typedef Superclass::InputPointType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::InputPointType

Definition at line 103 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ InterpolatorPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::InterpolatorPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::InterpolatorPointer

Definition at line 108 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ InterpolatorType

template<class TFixedImage, class TMovingImage>

typedef Superclass::InterpolatorType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::InterpolatorType

Definition at line 107 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFDerivativesIndexType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFDerivativesIndexType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFDerivativesIndexType

protected

Definition at line 184 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFDerivativesRegionType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFDerivativesRegionType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFDerivativesRegionType

protected

Definition at line 185 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFDerivativesSizeType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFDerivativesSizeType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFDerivativesSizeType

protected

Definition at line 186 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFDerivativesType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFDerivativesType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFDerivativesType

protected

Definition at line 179 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFIndexType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFIndexType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFIndexType

protected

Definition at line 181 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFRegionType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFRegionType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFRegionType

protected

Definition at line 182 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFSizeType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFSizeType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFSizeType

protected

Definition at line 183 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ JointPDFType

template<class TFixedImage, class TMovingImage>

typedef Superclass::JointPDFType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::JointPDFType

protected

Definition at line 178 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ KernelFunctionType

template<class TFixedImage, class TMovingImage>

typedef Superclass::KernelFunctionType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::KernelFunctionType

protected

Definition at line 188 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MarginalPDFType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MarginalPDFType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MarginalPDFType

protected

Definition at line 177 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MeasureType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MeasureType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MeasureType

Definition at line 119 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageConstPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageConstPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer

Definition at line 97 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageContinuousIndexType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageContinuousIndexType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageContinuousIndexType

protected

Definition at line 172 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageDerivativeScalesType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageDerivativeScalesType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageDerivativeScalesType

Definition at line 136 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageDerivativeType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageDerivativeType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageDerivativeType

protected

Definition at line 175 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageIndexType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageIndexType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageIndexType

protected

Definition at line 169 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageLimiterOutputType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageLimiterOutputType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageLimiterOutputType

Definition at line 134 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageLimiterType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageLimiterType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageLimiterType

Definition at line 130 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageMaskPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageMaskPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageMaskPointer

Definition at line 118 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageMaskType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageMaskType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageMaskType

Definition at line 117 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImagePixelType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImagePixelType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImagePixelType

Definition at line 96 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImagePointType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImagePointType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImagePointType

protected

Definition at line 171 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageRegionType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageRegionType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageRegionType

Definition at line 123 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ MovingImageType

template<class TFixedImage, class TMovingImage>

typedef Superclass::MovingImageType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType

Definition at line 95 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ NonZeroJacobianIndicesType

template<class TFixedImage, class TMovingImage>

typedef Superclass::NonZeroJacobianIndicesType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::NonZeroJacobianIndicesType

protected

Definition at line 189 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ OutputPointType

template<class TFixedImage, class TMovingImage>

typedef Superclass::OutputPointType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::OutputPointType

Definition at line 104 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ParametersType

template<class TFixedImage, class TMovingImage>

typedef Superclass::ParametersType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ParametersType

Definition at line 121 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ParzenValueContainerType

template<class TFixedImage, class TMovingImage>

typedef Superclass::ParzenValueContainerType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ParzenValueContainerType

protected

Definition at line 187 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ PDFValueType

template<class TFixedImage, class TMovingImage>

typedef Superclass::PDFValueType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::PDFValueType

protected

Definition at line 176 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ Pointer

template<class TFixedImage, class TMovingImage>

typedef SmartPointer< Self > itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::Pointer

Definition at line 81 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ RealType

template<class TFixedImage, class TMovingImage>

typedef Superclass::RealType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::RealType

Definition at line 109 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ Self

template<class TFixedImage, class TMovingImage>

typedef ParzenWindowNormalizedMutualInformationImageToImageMetric itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::Self

Standard class typedefs.

Definition at line 78 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ Superclass

template<class TFixedImage, class TMovingImage>

typedef ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage > itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::Superclass

Definition at line 80 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ TransformJacobianType

template<class TFixedImage, class TMovingImage>

typedef Superclass::TransformJacobianType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType

Definition at line 106 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ TransformParametersType

template<class TFixedImage, class TMovingImage>

typedef Superclass::TransformParametersType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType

Definition at line 105 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ TransformPointer

template<class TFixedImage, class TMovingImage>

typedef Superclass::TransformPointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer

Definition at line 102 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ TransformType

template<class TFixedImage, class TMovingImage>

typedef Superclass::TransformType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::TransformType

Definition at line 101 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

Constructor & Destructor Documentation

◆ ParzenWindowNormalizedMutualInformationImageToImageMetric() [1/2]

template<class TFixedImage, class TMovingImage>

itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ParzenWindowNormalizedMutualInformationImageToImageMetric ( )

inlineprotected

The constructor.

Definition at line 156 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ~ParzenWindowNormalizedMutualInformationImageToImageMetric()

template<class TFixedImage, class TMovingImage>

virtual itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::~ParzenWindowNormalizedMutualInformationImageToImageMetric ( )

inlineprotectedvirtual

The destructor.

Definition at line 159 of file itkParzenWindowNormalizedMutualInformationImageToImageMetric.h.

◆ ParzenWindowNormalizedMutualInformationImageToImageMetric() [2/2]

template<class TFixedImage, class TMovingImage>

itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ParzenWindowNormalizedMutualInformationImageToImageMetric ( const Self & )

private

The private constructor.

Member Function Documentation

◆ ComputeLogMarginalPDF()

template<class TFixedImage, class TMovingImage>

virtual void itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ComputeLogMarginalPDF ( MarginalPDFType & pdf ) const

protectedvirtual

Replace the marginal probabilities by log(probabilities) Changes the input pdf since they are not needed anymore!

◆ ComputeNormalizedMutualInformation()

template<class TFixedImage, class TMovingImage>

virtual MeasureType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::ComputeNormalizedMutualInformation ( MeasureType & jointEntropy ) const

protectedvirtual

Compute the normalized mutual information and the jointEntropy NMI = (Ef + Em) / Ej Ef = fixed marginal entropy = - sum_k sum_i p(i,k) log pf(k) Em = moving marginal entropy = - sum_k sum_i p(i,k) log pm(i) Ej = joint entropy = - sum_k sum_i p(i,k) log p(i,k)

◆ GetClassName()

template<class TFixedImage, class TMovingImage>

virtual const char* itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ParzenWindowHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in elastix::NormalizedMutualInformationMetric< TElastix >.

◆ GetValue()

template<class TFixedImage, class TMovingImage>

MeasureType itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GetValue ( const ParametersType & parameters ) const

Get the value: the negative normalized mutual information.

◆ GetValueAndDerivative()

template<class TFixedImage, class TMovingImage>

void itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivative	(	const ParametersType &	parameters,
		MeasureType &	Value,
		DerivativeType &	Derivative
	)		const

Get the value and derivatives for single valued optimizers.

◆ itkStaticConstMacro() [1/2]

template<class TFixedImage, class TMovingImage>

itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned	int,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

◆ itkStaticConstMacro() [2/2]

template<class TFixedImage, class TMovingImage>

itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned	int,
		MovingImageType::ImageDimension
	)

The moving image dimension.

◆ New()

template<class TFixedImage, class TMovingImage>

static Pointer itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::New ( )

static

Method for creation through the object factory.

◆ operator=()

template<class TFixedImage, class TMovingImage>

void itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::operator= ( const Self & )

private

The private copy constructor.

◆ PrintSelf()

template<class TFixedImage, class TMovingImage>

void itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protected

Print Self.

Detailed Description

template<class TFixedImage, class TMovingImage> class itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >

Public Types

Public Member Functions

Static Public Member Functions

Protected Types

Protected Member Functions

Private Member Functions

Additional Inherited Members

Member Typedef Documentation

◆ BSplineInterpolatorType

◆ CentralDifferenceGradientFilterType

◆ ConstPointer

◆ CoordinateRepresentationType

◆ DerivativeType

◆ FixedImageConstPointer

◆ FixedImageIndexType

◆ FixedImageIndexValueType

◆ FixedImageLimiterOutputType

◆ FixedImageLimiterType

◆ FixedImageMaskPointer

◆ FixedImageMaskType

◆ FixedImagePixelType

◆ FixedImagePointType

◆ FixedImageRegionType

◆ FixedImageType

◆ GradientImageFilterPointer

◆ GradientImageFilterType

◆ GradientImagePointer

◆ GradientImageType

◆ GradientPixelType

◆ ImageSampleContainerPointer

◆ ImageSampleContainerType

◆ ImageSamplerPointer

◆ ImageSamplerType

◆ IncrementalMarginalPDFType

◆ InputPointType

◆ InterpolatorPointer

◆ InterpolatorType

◆ JointPDFDerivativesIndexType

◆ JointPDFDerivativesRegionType

◆ JointPDFDerivativesSizeType

◆ JointPDFDerivativesType

◆ JointPDFIndexType

◆ JointPDFRegionType

◆ JointPDFSizeType

◆ JointPDFType

◆ KernelFunctionType

◆ MarginalPDFType

◆ MeasureType

◆ MovingImageConstPointer

◆ MovingImageContinuousIndexType

◆ MovingImageDerivativeScalesType

◆ MovingImageDerivativeType

◆ MovingImageIndexType

◆ MovingImageLimiterOutputType

◆ MovingImageLimiterType

◆ MovingImageMaskPointer

◆ MovingImageMaskType

◆ MovingImagePixelType

◆ MovingImagePointType

◆ MovingImageRegionType

◆ MovingImageType

◆ NonZeroJacobianIndicesType

◆ OutputPointType

◆ ParametersType

◆ ParzenValueContainerType

◆ PDFValueType

◆ Pointer

◆ RealType

◆ Self

◆ Superclass

◆ TransformJacobianType

◆ TransformParametersType

◆ TransformPointer

◆ TransformType

Constructor & Destructor Documentation

◆ ParzenWindowNormalizedMutualInformationImageToImageMetric() [1/2]

◆ ~ParzenWindowNormalizedMutualInformationImageToImageMetric()

◆ ParzenWindowNormalizedMutualInformationImageToImageMetric() [2/2]

template<class TFixedImage, class TMovingImage>
class itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< TFixedImage, TMovingImage >