itk::NDImageBase< TPixel > Class Template Reference

#include <itkNDImageBase.h>

Detailed Description

template<class TPixel>
class itk::NDImageBase< TPixel >

An image whose dimension can be specified at runtime.

The NDImageBase class is needed for the FullSearch optimizer. It allows run-time construction of an N-dimensional image. It has most of the functionality of a normal itk::Image.

Todo:

not all! An internal writer and reader are included for convenience.

The NewNDImage function defines the dimension of the image. CreateNewImage creates an instance of an itk::Image, with dimension as specified by NewNDImage. Note: the NewNDImage does not return an itk::Image, but an elx::NDImageTemplate.

Suggested way of using this class:
NDImageBase<short> var1 = NDImageBase::NewNDImage(3);
var1->CreateNewImage();
The result is similar as:
itk::Image<short,3>::Pointer var1 = itk::Image<short,3>::New();
except that the actual itk::Image is stored as member variable in the NDImageTemplate.

See also

FullSearchOptimizer, NDImageTemplate

Definition at line 58 of file itkNDImageBase.h.

Inheritance diagram for itk::NDImageBase< TPixel >:

Public Types
typedef Image< TPixel, 2 >::AccessorType	AccessorType
typedef SmartPointer< const Self >	ConstPointer
typedef DataObjectType::Pointer	DataObjectPointer
typedef DataObject	DataObjectType
typedef Array< IndexValueType >	IndexType
typedef ImageBase< 2 >::IndexValueType	IndexValueType
typedef Image< TPixel, 2 >::InternalPixelType	InternalPixelType
typedef Array< OffsetValueType >	OffsetType
typedef ImageBase< 2 >::OffsetValueType	OffsetValueType
typedef Image< TPixel, 2 >::PixelContainer	PixelContainer
typedef Image< TPixel, 2 >::PixelContainerConstPointer	PixelContainerConstPointer
typedef Image< TPixel, 2 >::PixelContainerPointer	PixelContainerPointer
typedef Image< TPixel, 2 >::PixelType	PixelType
typedef ImageBase< 2 >::PointType	Point2DType
typedef SmartPointer< Self >	Pointer
typedef Array< PointValueType >	PointType
typedef Point2DType::ValueType	PointValueType
typedef NDImageBase	Self
typedef Array< SizeValueType >	SizeType
typedef ImageBase< 2 >::SizeValueType	SizeValueType
typedef ImageBase< 2 >::SpacingType	Spacing2DType
typedef Array< SpacingValueType >	SpacingType
typedef Spacing2DType::ValueType	SpacingValueType
typedef Object	Superclass
typedef Image< TPixel, 2 >::ValueType	ValueType

Public Member Functions
virtual void	Allocate (void)=0
virtual IndexType	ComputeIndex (OffsetValueType offset) const =0
virtual OffsetValueType	ComputeOffset (const IndexType &ind) const =0
virtual void	CopyInformation (const DataObject *data)=0
virtual void	CreateNewImage (void)=0
virtual void	FillBuffer (const TPixel &value)=0
virtual TPixel *	GetBufferPointer ()=0
virtual const TPixel *	GetBufferPointer () const =0
virtual const char *	GetClassName () const
virtual DataObject *	GetImage (void)=0
virtual unsigned int	GetImageDimension (void)=0
virtual ImageIOBase *	GetImageIOReader (void)=0
virtual ImageIOBase *	GetImageIOWriter (void)=0
virtual const char *	GetInputFileName (void)=0
virtual const OffsetValueType *	GetOffsetTable () const =0
virtual PointType	GetOrigin (void)=0
virtual const char *	GetOutputFileName (void)=0
virtual const TPixel &	GetPixel (const IndexType &index) const =0
virtual TPixel &	GetPixel (const IndexType &index)=0
virtual AccessorType	GetPixelAccessor (void)=0
virtual const AccessorType	GetPixelAccessor (void) const =0
virtual PixelContainer *	GetPixelContainer ()=0
virtual const PixelContainer *	GetPixelContainer () const =0
virtual ProcessObject *	GetReader (void)=0
virtual SpacingType	GetSpacing (void)=0
virtual ProcessObject *	GetWriter (void)=0
virtual unsigned int	ImageDimension (void)=0
virtual void	Initialize (void)=0
TPixel &	operator[] (const IndexType &index)
const TPixel &	operator[] (const IndexType &index) const
virtual void	Read (void)=0
virtual void	SetImageIOReader (ImageIOBase *_arg)=0
virtual void	SetImageIOWriter (ImageIOBase *_arg)=0
virtual void	SetInputFileName (const char *)=0
virtual void	SetOrigin (const PointType &origin)=0
virtual void	SetOutputFileName (const char *)=0
virtual void	SetPixel (const IndexType &index, const TPixel &value)=0
virtual void	SetPixelContainer (PixelContainer *container)=0
virtual void	SetRegions (SizeType size)=0
virtual void	SetRequestedRegion (DataObject *data)=0
virtual void	SetSpacing (const SpacingType &spacing)=0
virtual void	Write (void)=0

Static Public Member Functions
static Pointer	NewNDImage (unsigned int dim)

Protected Member Functions
	NDImageBase ()
virtual	~NDImageBase ()

Private Member Functions
	NDImageBase (const Self &)
void	operator= (const Self &)

Member Typedef Documentation

AccessorType

template<class TPixel >

typedef Image< TPixel, 2 >::AccessorType itk::NDImageBase< TPixel >::AccessorType

Definition at line 83 of file itkNDImageBase.h.

ConstPointer

template<class TPixel >

typedef SmartPointer< const Self > itk::NDImageBase< TPixel >::ConstPointer

Definition at line 66 of file itkNDImageBase.h.

DataObjectPointer

template<class TPixel >

typedef DataObjectType::Pointer itk::NDImageBase< TPixel >::DataObjectPointer

Definition at line 77 of file itkNDImageBase.h.

DataObjectType

template<class TPixel >

typedef DataObject itk::NDImageBase< TPixel >::DataObjectType

Definition at line 74 of file itkNDImageBase.h.

IndexType

template<class TPixel >

typedef Array< IndexValueType > itk::NDImageBase< TPixel >::IndexType

ND versions of the index and sizetypes. Unlike in their counterparts in the itk::Image, their size can be defined at runtime. The elx::NDImageTemplate takes care of converting from/to these types to to/from the corresponding types in itk::Image.

Definition at line 102 of file itkNDImageBase.h.

IndexValueType

template<class TPixel >

typedef ImageBase< 2 >::IndexValueType itk::NDImageBase< TPixel >::IndexValueType

Definition at line 93 of file itkNDImageBase.h.

InternalPixelType

template<class TPixel >

typedef Image< TPixel, 2 >::InternalPixelType itk::NDImageBase< TPixel >::InternalPixelType

Definition at line 82 of file itkNDImageBase.h.

OffsetType

template<class TPixel >

typedef Array< OffsetValueType > itk::NDImageBase< TPixel >::OffsetType

Definition at line 106 of file itkNDImageBase.h.

OffsetValueType

template<class TPixel >

typedef ImageBase< 2 >::OffsetValueType itk::NDImageBase< TPixel >::OffsetValueType

Definition at line 95 of file itkNDImageBase.h.

PixelContainer

template<class TPixel >

typedef Image< TPixel, 2 >::PixelContainer itk::NDImageBase< TPixel >::PixelContainer

Definition at line 84 of file itkNDImageBase.h.

PixelContainerConstPointer

template<class TPixel >

typedef Image< TPixel, 2 >::PixelContainerConstPointer itk::NDImageBase< TPixel >::PixelContainerConstPointer

Definition at line 86 of file itkNDImageBase.h.

PixelContainerPointer

template<class TPixel >

typedef Image< TPixel, 2 >::PixelContainerPointer itk::NDImageBase< TPixel >::PixelContainerPointer

Definition at line 85 of file itkNDImageBase.h.

PixelType

template<class TPixel >

typedef Image< TPixel, 2 >::PixelType itk::NDImageBase< TPixel >::PixelType

Type definitions like normal itkImages, independent of the dimension

Definition at line 80 of file itkNDImageBase.h.

Point2DType

template<class TPixel >

typedef ImageBase< 2 >::PointType itk::NDImageBase< TPixel >::Point2DType

Definition at line 89 of file itkNDImageBase.h.

Pointer

template<class TPixel >

typedef SmartPointer< Self > itk::NDImageBase< TPixel >::Pointer

Definition at line 65 of file itkNDImageBase.h.

PointType

template<class TPixel >

typedef Array< PointValueType > itk::NDImageBase< TPixel >::PointType

Definition at line 105 of file itkNDImageBase.h.

PointValueType

template<class TPixel >

typedef Point2DType::ValueType itk::NDImageBase< TPixel >::PointValueType

Definition at line 92 of file itkNDImageBase.h.

Self

template<class TPixel >

typedef NDImageBase itk::NDImageBase< TPixel >::Self

Standard class typedefs.

Definition at line 63 of file itkNDImageBase.h.

SizeType

template<class TPixel >

typedef Array< SizeValueType > itk::NDImageBase< TPixel >::SizeType

Definition at line 103 of file itkNDImageBase.h.

SizeValueType

template<class TPixel >

typedef ImageBase< 2 >::SizeValueType itk::NDImageBase< TPixel >::SizeValueType

Definition at line 94 of file itkNDImageBase.h.

Spacing2DType

template<class TPixel >

typedef ImageBase< 2 >::SpacingType itk::NDImageBase< TPixel >::Spacing2DType

Definition at line 88 of file itkNDImageBase.h.

SpacingType

template<class TPixel >

typedef Array< SpacingValueType > itk::NDImageBase< TPixel >::SpacingType

Definition at line 104 of file itkNDImageBase.h.

SpacingValueType

template<class TPixel >

typedef Spacing2DType::ValueType itk::NDImageBase< TPixel >::SpacingValueType

Definition at line 91 of file itkNDImageBase.h.

Superclass

template<class TPixel >

typedef Object itk::NDImageBase< TPixel >::Superclass

Definition at line 64 of file itkNDImageBase.h.

ValueType

template<class TPixel >

typedef Image< TPixel, 2 >::ValueType itk::NDImageBase< TPixel >::ValueType

Definition at line 81 of file itkNDImageBase.h.

Constructor & Destructor Documentation

NDImageBase() [1/2]

template<class TPixel >

itk::NDImageBase< TPixel >::NDImageBase ( )

inlineprotected

Definition at line 221 of file itkNDImageBase.h.

~NDImageBase()

template<class TPixel >

virtual itk::NDImageBase< TPixel >::~NDImageBase ( )

inlineprotectedvirtual

Definition at line 222 of file itkNDImageBase.h.

NDImageBase() [2/2]

template<class TPixel >

itk::NDImageBase< TPixel >::NDImageBase ( const Self &  )

private

Member Function Documentation

Allocate()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::Allocate ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

ComputeIndex()

template<class TPixel >

virtual IndexType itk::NDImageBase< TPixel >::ComputeIndex ( OffsetValueType  offset ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

ComputeOffset()

template<class TPixel >

virtual OffsetValueType itk::NDImageBase< TPixel >::ComputeOffset ( const IndexType &  ind ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

CopyInformation()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::CopyInformation ( const DataObject *  data )

pure virtual

Todo:

Transform IndexToPoint methods.

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

CreateNewImage()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::CreateNewImage ( void  )

pure virtual

Use New method to create a new actual image

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

FillBuffer()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::FillBuffer ( const TPixel &  value )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetBufferPointer() [1/2]

template<class TPixel >

virtual TPixel* itk::NDImageBase< TPixel >::GetBufferPointer ( )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetBufferPointer() [2/2]

template<class TPixel >

virtual const TPixel* itk::NDImageBase< TPixel >::GetBufferPointer ( ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetClassName()

template<class TPixel >

virtual const char* itk::NDImageBase< TPixel >::GetClassName ( ) const

virtual

Method for creation through the object factory. Run-time type information (and related methods).

Reimplemented in itk::NDImageTemplate< TPixel, VDimension >.

GetImage()

template<class TPixel >

virtual DataObject* itk::NDImageBase< TPixel >::GetImage ( void  )

pure virtual

Get the actual image

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetImageDimension()

template<class TPixel >

virtual unsigned int itk::NDImageBase< TPixel >::GetImageDimension ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetImageIOReader()

template<class TPixel >

virtual ImageIOBase* itk::NDImageBase< TPixel >::GetImageIOReader ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetImageIOWriter()

template<class TPixel >

virtual ImageIOBase* itk::NDImageBase< TPixel >::GetImageIOWriter ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetInputFileName()

template<class TPixel >

virtual const char* itk::NDImageBase< TPixel >::GetInputFileName ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetOffsetTable()

template<class TPixel >

virtual const OffsetValueType* itk::NDImageBase< TPixel >::GetOffsetTable ( ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetOrigin()

template<class TPixel >

virtual PointType itk::NDImageBase< TPixel >::GetOrigin ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetOutputFileName()

template<class TPixel >

virtual const char* itk::NDImageBase< TPixel >::GetOutputFileName ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetPixel() [1/2]

template<class TPixel >

virtual const TPixel& itk::NDImageBase< TPixel >::GetPixel ( const IndexType &  index ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetPixel() [2/2]

template<class TPixel >

virtual TPixel& itk::NDImageBase< TPixel >::GetPixel ( const IndexType &  index )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetPixelAccessor() [1/2]

template<class TPixel >

virtual AccessorType itk::NDImageBase< TPixel >::GetPixelAccessor ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetPixelAccessor() [2/2]

template<class TPixel >

virtual const AccessorType itk::NDImageBase< TPixel >::GetPixelAccessor ( void  ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetPixelContainer() [1/2]

template<class TPixel >

virtual PixelContainer* itk::NDImageBase< TPixel >::GetPixelContainer ( )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetPixelContainer() [2/2]

template<class TPixel >

virtual const PixelContainer* itk::NDImageBase< TPixel >::GetPixelContainer ( ) const

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetReader()

template<class TPixel >

virtual ProcessObject* itk::NDImageBase< TPixel >::GetReader ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetSpacing()

template<class TPixel >

virtual SpacingType itk::NDImageBase< TPixel >::GetSpacing ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

GetWriter()

template<class TPixel >

virtual ProcessObject* itk::NDImageBase< TPixel >::GetWriter ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

ImageDimension()

template<class TPixel >

virtual unsigned int itk::NDImageBase< TPixel >::ImageDimension ( void  )

pure virtual

Extra functions for NDImage. Get the Dimension.

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

Initialize()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::Initialize ( void  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

NewNDImage()

template<class TPixel >

NDImageBase< TPixel >::Pointer itk::NDImageBase< TPixel >::NewNDImage ( unsigned int  dim )

static

Definition at line 242 of file itkNDImageBase.h.

operator=()

template<class TPixel >

void itk::NDImageBase< TPixel >::operator= ( const Self &  )

private

operator[]() [1/2]

template<class TPixel >

TPixel& itk::NDImageBase< TPixel >::operator[] ( const IndexType &  index )

inline

Definition at line 138 of file itkNDImageBase.h.

operator[]() [2/2]

template<class TPixel >

const TPixel& itk::NDImageBase< TPixel >::operator[] ( const IndexType &  index ) const

inline

Definition at line 140 of file itkNDImageBase.h.

Read()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::Read ( void  )

pure virtual

Read image data from file into the actual image

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetImageIOReader()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetImageIOReader ( ImageIOBase *  _arg )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetImageIOWriter()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetImageIOWriter ( ImageIOBase *  _arg )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetInputFileName()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetInputFileName ( const char *  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetOrigin()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetOrigin ( const PointType &  origin )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetOutputFileName()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetOutputFileName ( const char *  )

pure virtual

Set/Get the Input/OutputFileName

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetPixel()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetPixel ( const IndexType &  index, const TPixel &  value  )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetPixelContainer()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetPixelContainer ( PixelContainer *  container )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetRegions()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetRegions ( SizeType  size )

pure virtual

Todo:

: extend to direction cosines; but not needed for now in elastix

Region typedef support. A region is used to specify a subset of an image.

Todo:

an NDRegionType should first be declared, in the same way as NDImage use SetRegions(size) for now. then knowlegde of the RegionType is not necessary. alternative: forget about the regiontype and add the functions SetLargestPossibleRegion, SetRegions etc with arguments (index,size) or maybe: ImageIORegion

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetRequestedRegion()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetRequestedRegion ( DataObject *  data )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

SetSpacing()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::SetSpacing ( const SpacingType &  spacing )

pure virtual

Implemented in itk::NDImageTemplate< TPixel, VDimension >.

Write()

template<class TPixel >

virtual void itk::NDImageBase< TPixel >::Write ( void  )

pure virtual

Write the actual image to file.

Implemented in itk::NDImageTemplate< TPixel, VDimension >.