elastix::NormalizedGradientCorrelationMetric< TElastix > Class Template Reference

#include <elxNormalizedGradientCorrelationMetric.h>

Detailed Description

template<class TElastix>
class elastix::NormalizedGradientCorrelationMetric< TElastix >

An metric based on the itk::NormalizedGradientCorrelationImageToImageMetric.

Definition at line 37 of file elxNormalizedGradientCorrelationMetric.h.

Inheritance diagram for elastix::NormalizedGradientCorrelationMetric< TElastix >:

Public Types
typedef Superclass2::ConfigurationPointer	ConfigurationPointer
typedef Superclass2::ConfigurationType	ConfigurationType
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Superclass1::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass1::DerivativeType	DerivativeType
typedef Superclass2::ElastixPointer	ElastixPointer
typedef Superclass2::ElastixType	ElastixType
typedef Superclass1::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass1::FixedImageLimiterOutputType	FixedImageLimiterOutputType
typedef Superclass1::FixedImageLimiterType	FixedImageLimiterType
typedef Superclass1::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass1::FixedImageMaskType	FixedImageMaskType
typedef Superclass1::FixedImagePixelType	FixedImagePixelType
typedef Superclass1::FixedImageRegionType	FixedImageRegionType
typedef Superclass1::FixedImageType	FixedImageType
typedef Superclass1::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass1::GradientImageFilterType	GradientImageFilterType
typedef Superclass1::GradientImagePointer	GradientImagePointer
typedef Superclass1::GradientImageType	GradientImageType
typedef Superclass1::GradientPixelType	GradientPixelType
typedef Superclass1::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass1::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass1::ImageSamplerPointer	ImageSamplerPointer
typedef Superclass1::ImageSamplerType	ImageSamplerType
typedef Superclass1::InputPointType	InputPointType
typedef Superclass1::InterpolatorPointer	InterpolatorPointer
typedef Superclass1::InterpolatorType	InterpolatorType
typedef Superclass2::ITKBaseType	ITKBaseType
typedef Superclass1::MeasureType	MeasureType
typedef Superclass1::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass1::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType
typedef Superclass1::MovingImageLimiterOutputType	MovingImageLimiterOutputType
typedef Superclass1::MovingImageLimiterType	MovingImageLimiterType
typedef Superclass1::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass1::MovingImageMaskType	MovingImageMaskType
typedef Superclass1::MovingImagePixelType	MovingImagePixelType
typedef Superclass1::MovingImageRegionType	MovingImageRegionType
typedef Superclass1::MovingImageType	MovingImageType
typedef Superclass1::OutputPointType	OutputPointType
typedef Superclass1::ParametersType	ParametersType
typedef itk::SmartPointer< Self >	Pointer
typedef Superclass1::RealType	RealType
typedef Superclass2::RegistrationPointer	RegistrationPointer
typedef Superclass2::RegistrationType	RegistrationType
typedef NormalizedGradientCorrelationMetric	Self
typedef itk::NormalizedGradientCorrelationImageToImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType >	Superclass1
typedef MetricBase< TElastix >	Superclass2
typedef Superclass1::TransformJacobianType	TransformJacobianType
typedef Superclass1::TransformParametersType	TransformParametersType
typedef Superclass1::TransformPointer	TransformPointer
typedef Superclass1::TransformType	TransformType
Public Types inherited from itk::NormalizedGradientCorrelationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef CastFixedImageFilterType::Pointer	CastFixedImageFilterPointer
typedef itk::CastImageFilter< FixedImageType, FixedGradientImageType >	CastFixedImageFilterType
typedef CastMovedImageFilterType::Pointer	CastMovedImageFilterPointer
typedef itk::CastImageFilter< TransformedMovingImageType, MovedGradientImageType >	CastMovedImageFilterType
typedef CombinationTransformType::Pointer	CombinationTransformPointer
typedef itk::AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::DerivativeType	DerivativeType
typedef itk::Image< RealType, itkGetStaticConstMacro(FixedImageDimension) >	FixedGradientImageType
typedef FixedGradientImageType::PixelType	FixedGradientPixelType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef MetricBase< TElastix >::FixedImageType ::PixelType	FixedImagePixelType
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef InterpolatorType::Pointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef itk::Image< unsigned char, itkGetStaticConstMacro(FixedImageDimension) >	MaskImageType
typedef MaskImageType::Pointer	MaskImageTypePointer
typedef Superclass::MeasureType	MeasureType
typedef itk::Image< RealType, itkGetStaticConstMacro(MovedImageDimension) >	MovedGradientImageType
typedef MovedGradientImageType::PixelType	MovedGradientPixelType
typedef MetricBase< TElastix >::MovingImageType ::PixelType	MovedImagePixelType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageRegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef itk::Optimizer	OptimizerType
typedef SmartPointer< Self >	Pointer
typedef RayCastInterpolatorType::Pointer	RayCastInterpolatorPointer
typedef itk::AdvancedRayCastInterpolateImageFunction< MovingImageType, ScalarType >	RayCastInterpolatorType
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef OptimizerType::ScalesType	ScalesType
typedef NormalizedGradientCorrelationImageToImageMetric	Self
typedef AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass
typedef TransformType::ConstPointer	TransformConstPointer
typedef itk::Image< FixedImagePixelType, itkGetStaticConstMacro(FixedImageDimension) >	TransformedMovingImageType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef TransformMovingImageFilterType::Pointer	TransformMovingImageFilterPointer
typedef itk::ResampleImageFilter< MovingImageType, TransformedMovingImageType >	TransformMovingImageFilterType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType
typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType
typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType
typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType
typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer
typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::PixelType	FixedImagePixelType
typedef FixedImageType::Pointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef vnl_sparse_matrix< HessianValueType >	HessianType
typedef DerivativeType::ValueType	HessianValueType
typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer
typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType
typedef ImageSamplerType::Pointer	ImageSamplerPointer
typedef ImageSamplerBase< FixedImageType >	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType
typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType
typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer
typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef MovingImageType::Pointer	MovingImagePointer
typedef MovingImageType::RegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef AdvancedImageToImageMetric	Self
typedef ImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass
typedef itk::MultiThreader	ThreaderType
typedef ThreaderType::ThreadInfoStruct	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from elastix::MetricBase< TElastix >
typedef itk::AdvancedImageToImageMetric< FixedImageType, MovingImageType >	AdvancedMetricType
typedef Superclass::ConfigurationPointer	ConfigurationPointer
typedef Superclass::ConfigurationType	ConfigurationType
typedef ITKBaseType::ParametersValueType	CoordinateRepresentationType
typedef Superclass::ElastixPointer	ElastixPointer
typedef Superclass::ElastixType	ElastixType
typedef ElastixType::FixedImageType	FixedImageType
typedef itk::PointSet< CoordinateRepresentationType, FixedImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, FixedImageDimension, FixedImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	FixedPointSetType
typedef FixedImageType::PointType	FixedPointType
typedef FixedPointType::ValueType	FixedPointValueType
typedef AdvancedMetricType::ImageSamplerType	ImageSamplerBaseType
typedef itk::SingleValuedCostFunction	ITKBaseType
typedef ITKBaseType::MeasureType	MeasureType
typedef AdvancedMetricType::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType
typedef ElastixType::MovingImageType	MovingImageType
typedef itk::PointSet< CoordinateRepresentationType, MovingImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, MovingImageDimension, MovingImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	MovingPointSetType
typedef MovingImageType::PointType	MovingPointType
typedef MovingPointType::ValueType	MovingPointValueType
typedef Superclass::RegistrationPointer	RegistrationPointer
typedef Superclass::RegistrationType	RegistrationType
typedef MetricBase	Self
typedef BaseComponentSE< TElastix >	Superclass
Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef ElastixType::ConfigurationPointer	ConfigurationPointer
typedef ElastixType::ConfigurationType	ConfigurationType
typedef itk::WeakPointer< ElastixType >	ElastixPointer
typedef TElastix	ElastixType
typedef RegistrationType *	RegistrationPointer
typedef ElastixType::RegistrationBaseType	RegistrationType
typedef BaseComponentSE	Self
typedef BaseComponent	Superclass

Public Member Functions
virtual void	BeforeEachResolution (void)
virtual void	BeforeRegistration (void)
	elxClassNameMacro ("NormalizedGradientCorrelation")
virtual const char *	GetClassName () const
virtual void	Initialize (void) throw ( itk::ExceptionObject )
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
Public Member Functions inherited from itk::NormalizedGradientCorrelationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual void	GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const
virtual const double &	GetDerivativeDelta ()
virtual const ScalesType &	GetScales ()
virtual MeasureType	GetValue (const TransformParametersType &parameters) const
virtual void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &derivative) const
	itkStaticConstMacro (FixedImageDimension, unsigned int, MetricBase< TElastix >::FixedImageType ::ImageDimension)
	itkStaticConstMacro (MovedImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SetDerivativeDelta (double _arg)
virtual void	SetScales (ScalesType _arg)
void	SetTransformParameters (const TransformParametersType &parameters) const
void	WriteGradientImagesToFiles (void) const
Public Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
virtual double	GetFixedLimitRangeRatio () const
virtual ImageSamplerType *	GetImageSampler (void) const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
const AdvancedTransformType *	GetTransform (void) const ITK_OVERRIDE
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
	itkStaticConstMacro (MovingImageDimension, unsigned int, MetricBase< TElastix >::MovingImageType ::ImageDimension)
	itkStaticConstMacro (FixedImageDimension, unsigned int, MetricBase< TElastix >::FixedImageType ::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetNumberOfThreads (ThreadIdType numberOfThreads)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()
Public Member Functions inherited from elastix::MetricBase< TElastix >
virtual void	AfterEachIterationBase (void)
virtual void	BeforeEachResolutionBase (void)
virtual ImageSamplerBaseType *	GetAdvancedMetricImageSampler (void) const
virtual bool	GetAdvancedMetricUseImageSampler (void) const
virtual ITKBaseType *	GetAsITKBaseType (void)
virtual const ITKBaseType *	GetAsITKBaseType (void) const
virtual MeasureType	GetCurrentExactMetricValue (void) const
virtual bool	GetShowExactMetricValue (void) const
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SelectNewSamples (void)
virtual void	SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler)
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
virtual ConfigurationType *	GetConfiguration (void) const
virtual ElastixType *	GetElastix (void) const
virtual RegistrationPointer	GetRegistration (void) const
virtual void	SetConfiguration (ConfigurationType *_arg)
virtual void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration (void)
virtual void	AfterEachResolution (void)
virtual void	AfterEachResolutionBase (void)
virtual void	AfterRegistration (void)
virtual void	AfterRegistrationBase (void)
virtual int	BeforeAll (void)
virtual int	BeforeAllBase (void)
virtual void	BeforeRegistrationBase (void)
std::string	ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision) const
virtual const char *	elxGetClassName (void) const
virtual const char *	GetComponentLabel (void) const
	itkTypeMacroNoParent (BaseComponent)
virtual void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::NormalizedGradientCorrelationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static Pointer	New ()

Protected Member Functions
	NormalizedGradientCorrelationMetric ()
virtual	~NormalizedGradientCorrelationMetric ()
Protected Member Functions inherited from itk::NormalizedGradientCorrelationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
void	ComputeMeanFixedGradient (void) const
void	ComputeMeanMovedGradient (void) const
MeasureType	ComputeMeasure (const TransformParametersType &parameters) const
	NormalizedGradientCorrelationImageToImageMetric ()
virtual void	PrintSelf (std::ostream &os, Indent indent) const
virtual	~NormalizedGradientCorrelationImageToImageMetric ()
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &value) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
virtual void	CheckForAdvancedTransform (void)
virtual void	CheckForBSplineInterpolator (void)
virtual void	CheckForBSplineTransform (void) const
virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual void	ComputeFixedImageExtrema (const FixedImageType *image, const FixedImageRegionType &region)
virtual void	ComputeMovingImageExtrema (const MovingImageType *image, const MovingImageRegionType &region)
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
virtual void	InitializeImageSampler (void) throw ( ExceptionObject )
virtual void	InitializeLimiters (void)
virtual void	InitializeThreadingParameters (void) const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback (void) const
void	LaunchGetValueThreaderCallback (void) const
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType threadID)
virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)
virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
virtual	~AdvancedImageToImageMetric ()
Protected Member Functions inherited from elastix::MetricBase< TElastix >
virtual MeasureType	GetExactValue (const ParametersType &parameters)
	MetricBase ()
virtual	~MetricBase ()
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()
virtual	~BaseComponentSE ()
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()
virtual	~BaseComponent ()

Private Member Functions
	NormalizedGradientCorrelationMetric (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Protected Types inherited from itk::NormalizedGradientCorrelationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef NeighborhoodOperatorImageFilter< FixedGradientImageType, FixedGradientImageType >	FixedSobelFilter
typedef NeighborhoodOperatorImageFilter< MovedGradientImageType, MovedGradientImageType >	MovedSobelFilter
Protected Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType
typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer
typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType
typedef FixedImageType::IndexType	FixedImageIndexType
typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType
typedef TransformType::InputPointType	FixedImagePointType
typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType
typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType
typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType
typedef MovingImageType::IndexType	MovingImageIndexType
typedef TransformType::OutputPointType	MovingImagePointType
typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType
Protected Types inherited from elastix::MetricBase< TElastix >
typedef ExactMetricImageSamplerType::Pointer	ExactMetricImageSamplerPointer
typedef itk::ImageGridSampler< FixedImageType >	ExactMetricImageSamplerType
typedef ExactMetricImageSamplerType::SampleGridSpacingType	ExactMetricSampleGridSpacingType
typedef ITKBaseType::ParametersType	ParametersType
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static ITK_THREAD_RETURN_TYPE	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_TYPE	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_TYPE	GetValueThreaderCallback (void *arg)
Protected Attributes inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
AdvancedTransformType::Pointer	m_AdvancedTransform
BSplineInterpolatorPointer	m_BSplineInterpolator
BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat
CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter
FixedImageLimiterPointer	m_FixedImageLimiter
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables
ThreadIdType	m_GetValuePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
bool	m_InterpolatorIsBSpline
bool	m_InterpolatorIsBSplineFloat
bool	m_InterpolatorIsLinear
bool	m_InterpolatorIsReducedBSpline
LinearInterpolatorPointer	m_LinearInterpolator
MovingImageLimiterPointer	m_MovingImageLimiter
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsAdvanced
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
bool	m_UseOpenMP
Protected Attributes inherited from elastix::MetricBase< TElastix >
MeasureType	m_CurrentExactMetricValue
unsigned int	m_ExactMetricEachXNumberOfIterations
ExactMetricSampleGridSpacingType	m_ExactMetricSampleGridSpacing
ExactMetricImageSamplerPointer	m_ExactMetricSampler
bool	m_ShowExactMetricValue
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration
ElastixPointer	m_Elastix
RegistrationPointer	m_Registration

Member Typedef Documentation

ConfigurationPointer

template<class TElastix >

typedef Superclass2::ConfigurationPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::ConfigurationPointer

Definition at line 125 of file elxNormalizedGradientCorrelationMetric.h.

ConfigurationType

template<class TElastix >

typedef Superclass2::ConfigurationType elastix::NormalizedGradientCorrelationMetric< TElastix >::ConfigurationType

Definition at line 124 of file elxNormalizedGradientCorrelationMetric.h.

ConstPointer

template<class TElastix >

typedef itk::SmartPointer< const Self > elastix::NormalizedGradientCorrelationMetric< TElastix >::ConstPointer

Definition at line 52 of file elxNormalizedGradientCorrelationMetric.h.

CoordinateRepresentationType

template<class TElastix >

typedef Superclass1::CoordinateRepresentationType elastix::NormalizedGradientCorrelationMetric< TElastix >::CoordinateRepresentationType

Typedefs from the superclass.

Definition at line 69 of file elxNormalizedGradientCorrelationMetric.h.

DerivativeType

template<class TElastix >

typedef Superclass1::DerivativeType elastix::NormalizedGradientCorrelationMetric< TElastix >::DerivativeType

Definition at line 95 of file elxNormalizedGradientCorrelationMetric.h.

ElastixPointer

template<class TElastix >

typedef Superclass2::ElastixPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::ElastixPointer

Definition at line 123 of file elxNormalizedGradientCorrelationMetric.h.

ElastixType

template<class TElastix >

typedef Superclass2::ElastixType elastix::NormalizedGradientCorrelationMetric< TElastix >::ElastixType

Typedef's inherited from Elastix.

Definition at line 122 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageConstPointer

template<class TElastix >

typedef Superclass1::FixedImageConstPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageConstPointer

Definition at line 74 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageLimiterOutputType

template<class TElastix >

typedef Superclass1::FixedImageLimiterOutputType elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageLimiterOutputType

Definition at line 107 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageLimiterType

template<class TElastix >

typedef Superclass1::FixedImageLimiterType elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageLimiterType

Definition at line 104 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageMaskPointer

template<class TElastix >

typedef Superclass1::FixedImageMaskPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageMaskPointer

Definition at line 91 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageMaskType

template<class TElastix >

typedef Superclass1::FixedImageMaskType elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageMaskType

Definition at line 90 of file elxNormalizedGradientCorrelationMetric.h.

FixedImagePixelType

template<class TElastix >

typedef Superclass1::FixedImagePixelType elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImagePixelType

Definition at line 97 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageRegionType

template<class TElastix >

typedef Superclass1::FixedImageRegionType elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageRegionType

Definition at line 75 of file elxNormalizedGradientCorrelationMetric.h.

FixedImageType

template<class TElastix >

typedef Superclass1::FixedImageType elastix::NormalizedGradientCorrelationMetric< TElastix >::FixedImageType

Definition at line 73 of file elxNormalizedGradientCorrelationMetric.h.

GradientImageFilterPointer

template<class TElastix >

typedef Superclass1::GradientImageFilterPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::GradientImageFilterPointer

Definition at line 89 of file elxNormalizedGradientCorrelationMetric.h.

GradientImageFilterType

template<class TElastix >

typedef Superclass1::GradientImageFilterType elastix::NormalizedGradientCorrelationMetric< TElastix >::GradientImageFilterType

Definition at line 88 of file elxNormalizedGradientCorrelationMetric.h.

GradientImagePointer

template<class TElastix >

typedef Superclass1::GradientImagePointer elastix::NormalizedGradientCorrelationMetric< TElastix >::GradientImagePointer

Definition at line 87 of file elxNormalizedGradientCorrelationMetric.h.

GradientImageType

template<class TElastix >

typedef Superclass1::GradientImageType elastix::NormalizedGradientCorrelationMetric< TElastix >::GradientImageType

Definition at line 86 of file elxNormalizedGradientCorrelationMetric.h.

GradientPixelType

template<class TElastix >

typedef Superclass1::GradientPixelType elastix::NormalizedGradientCorrelationMetric< TElastix >::GradientPixelType

Definition at line 85 of file elxNormalizedGradientCorrelationMetric.h.

ImageSampleContainerPointer

template<class TElastix >

typedef Superclass1::ImageSampleContainerPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::ImageSampleContainerPointer

Definition at line 103 of file elxNormalizedGradientCorrelationMetric.h.

ImageSampleContainerType

template<class TElastix >

typedef Superclass1::ImageSampleContainerType elastix::NormalizedGradientCorrelationMetric< TElastix >::ImageSampleContainerType

Definition at line 101 of file elxNormalizedGradientCorrelationMetric.h.

ImageSamplerPointer

template<class TElastix >

typedef Superclass1::ImageSamplerPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::ImageSamplerPointer

Definition at line 100 of file elxNormalizedGradientCorrelationMetric.h.

ImageSamplerType

template<class TElastix >

typedef Superclass1::ImageSamplerType elastix::NormalizedGradientCorrelationMetric< TElastix >::ImageSamplerType

Definition at line 99 of file elxNormalizedGradientCorrelationMetric.h.

InputPointType

template<class TElastix >

typedef Superclass1::InputPointType elastix::NormalizedGradientCorrelationMetric< TElastix >::InputPointType

Definition at line 78 of file elxNormalizedGradientCorrelationMetric.h.

InterpolatorPointer

template<class TElastix >

typedef Superclass1::InterpolatorPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::InterpolatorPointer

Definition at line 83 of file elxNormalizedGradientCorrelationMetric.h.

InterpolatorType

template<class TElastix >

typedef Superclass1::InterpolatorType elastix::NormalizedGradientCorrelationMetric< TElastix >::InterpolatorType

Definition at line 82 of file elxNormalizedGradientCorrelationMetric.h.

ITKBaseType

template<class TElastix >

typedef Superclass2::ITKBaseType elastix::NormalizedGradientCorrelationMetric< TElastix >::ITKBaseType

Definition at line 128 of file elxNormalizedGradientCorrelationMetric.h.

MeasureType

template<class TElastix >

typedef Superclass1::MeasureType elastix::NormalizedGradientCorrelationMetric< TElastix >::MeasureType

Definition at line 94 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageConstPointer

template<class TElastix >

typedef Superclass1::MovingImageConstPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageConstPointer

Definition at line 72 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageDerivativeScalesType

template<class TElastix >

typedef Superclass1::MovingImageDerivativeScalesType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageDerivativeScalesType

Definition at line 111 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageLimiterOutputType

template<class TElastix >

typedef Superclass1::MovingImageLimiterOutputType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageLimiterOutputType

Definition at line 109 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageLimiterType

template<class TElastix >

typedef Superclass1::MovingImageLimiterType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageLimiterType

Definition at line 105 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageMaskPointer

template<class TElastix >

typedef Superclass1::MovingImageMaskPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageMaskPointer

Definition at line 93 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageMaskType

template<class TElastix >

typedef Superclass1::MovingImageMaskType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageMaskType

Definition at line 92 of file elxNormalizedGradientCorrelationMetric.h.

MovingImagePixelType

template<class TElastix >

typedef Superclass1::MovingImagePixelType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImagePixelType

Definition at line 71 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageRegionType

template<class TElastix >

typedef Superclass1::MovingImageRegionType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageRegionType

Definition at line 98 of file elxNormalizedGradientCorrelationMetric.h.

MovingImageType

template<class TElastix >

typedef Superclass1::MovingImageType elastix::NormalizedGradientCorrelationMetric< TElastix >::MovingImageType

Definition at line 70 of file elxNormalizedGradientCorrelationMetric.h.

OutputPointType

template<class TElastix >

typedef Superclass1::OutputPointType elastix::NormalizedGradientCorrelationMetric< TElastix >::OutputPointType

Definition at line 79 of file elxNormalizedGradientCorrelationMetric.h.

ParametersType

template<class TElastix >

typedef Superclass1::ParametersType elastix::NormalizedGradientCorrelationMetric< TElastix >::ParametersType

Definition at line 96 of file elxNormalizedGradientCorrelationMetric.h.

Pointer

template<class TElastix >

typedef itk::SmartPointer< Self > elastix::NormalizedGradientCorrelationMetric< TElastix >::Pointer

Definition at line 51 of file elxNormalizedGradientCorrelationMetric.h.

RealType

template<class TElastix >

typedef Superclass1::RealType elastix::NormalizedGradientCorrelationMetric< TElastix >::RealType

Definition at line 84 of file elxNormalizedGradientCorrelationMetric.h.

RegistrationPointer

template<class TElastix >

typedef Superclass2::RegistrationPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::RegistrationPointer

Definition at line 127 of file elxNormalizedGradientCorrelationMetric.h.

RegistrationType

template<class TElastix >

typedef Superclass2::RegistrationType elastix::NormalizedGradientCorrelationMetric< TElastix >::RegistrationType

Definition at line 126 of file elxNormalizedGradientCorrelationMetric.h.

Self

template<class TElastix >

typedef NormalizedGradientCorrelationMetric elastix::NormalizedGradientCorrelationMetric< TElastix >::Self

Standard ITK-stuff.

Definition at line 46 of file elxNormalizedGradientCorrelationMetric.h.

Superclass1

template<class TElastix >

typedef itk::NormalizedGradientCorrelationImageToImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType > elastix::NormalizedGradientCorrelationMetric< TElastix >::Superclass1

Definition at line 49 of file elxNormalizedGradientCorrelationMetric.h.

Superclass2

template<class TElastix >

typedef MetricBase< TElastix > elastix::NormalizedGradientCorrelationMetric< TElastix >::Superclass2

Definition at line 50 of file elxNormalizedGradientCorrelationMetric.h.

TransformJacobianType

template<class TElastix >

typedef Superclass1::TransformJacobianType elastix::NormalizedGradientCorrelationMetric< TElastix >::TransformJacobianType

Definition at line 81 of file elxNormalizedGradientCorrelationMetric.h.

TransformParametersType

template<class TElastix >

typedef Superclass1::TransformParametersType elastix::NormalizedGradientCorrelationMetric< TElastix >::TransformParametersType

Definition at line 80 of file elxNormalizedGradientCorrelationMetric.h.

TransformPointer

template<class TElastix >

typedef Superclass1::TransformPointer elastix::NormalizedGradientCorrelationMetric< TElastix >::TransformPointer

Definition at line 77 of file elxNormalizedGradientCorrelationMetric.h.

TransformType

template<class TElastix >

typedef Superclass1::TransformType elastix::NormalizedGradientCorrelationMetric< TElastix >::TransformType

Definition at line 76 of file elxNormalizedGradientCorrelationMetric.h.

Constructor & Destructor Documentation

NormalizedGradientCorrelationMetric() [1/2]

template<class TElastix >

elastix::NormalizedGradientCorrelationMetric< TElastix >::NormalizedGradientCorrelationMetric ( )

inlineprotected

The constructor.

Definition at line 147 of file elxNormalizedGradientCorrelationMetric.h.

~NormalizedGradientCorrelationMetric()

template<class TElastix >

virtual elastix::NormalizedGradientCorrelationMetric< TElastix >::~NormalizedGradientCorrelationMetric ( )

inlineprotectedvirtual

The destructor.

Definition at line 149 of file elxNormalizedGradientCorrelationMetric.h.

NormalizedGradientCorrelationMetric() [2/2]

template<class TElastix >

elastix::NormalizedGradientCorrelationMetric< TElastix >::NormalizedGradientCorrelationMetric ( const Self &  )

private

The private constructor.

Member Function Documentation

BeforeEachResolution()

template<class TElastix >

virtual void elastix::NormalizedGradientCorrelationMetric< TElastix >::BeforeEachResolution ( void  )

virtual

Reimplemented from elastix::BaseComponent.

BeforeRegistration()

template<class TElastix >

virtual void elastix::NormalizedGradientCorrelationMetric< TElastix >::BeforeRegistration ( void  )

virtual

Do some things before each resolution:

• Set CheckNumberOfSamples setting
• Set UseNormalization setting

Reimplemented from elastix::BaseComponent.

elxClassNameMacro()

template<class TElastix >

elastix::NormalizedGradientCorrelationMetric< TElastix >::elxClassNameMacro

(

"NormalizedGradientCorrelation"

)

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "NormalizedGradientCorrelation")

GetClassName()

template<class TElastix >

virtual const char* elastix::NormalizedGradientCorrelationMetric< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::MetricBase< TElastix >.

Initialize()

template<class TElastix >

virtual void elastix::NormalizedGradientCorrelationMetric< TElastix >::Initialize ( void  ) throw ( itk::ExceptionObject )

virtual

Sets up a timer to measure the initialization time and calls the Superclass' implementation.

Reimplemented from itk::NormalizedGradientCorrelationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >.

itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::NormalizedGradientCorrelationMetric< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned	int,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::NormalizedGradientCorrelationMetric< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned	int,
		MovingImageType::ImageDimension
	)

The moving image dimension.

New()

template<class TElastix >

static Pointer elastix::NormalizedGradientCorrelationMetric< TElastix >::New ( )

static

Method for creation through the object factory.

operator=()

template<class TElastix >

void elastix::NormalizedGradientCorrelationMetric< TElastix >::operator= ( const Self &  )

private

The private copy constructor.