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Home | Main Page | Modules | Namespace List | Class Hierarchy | Alphabetical List | Data Structures | File List | Namespace Members | Data Fields | Globals | Related Pages |
Namespaces | |
| namespace | Statistics |
Data Structures | |
| class | AdaptiveStochasticGradientDescentOptimizer |
| This class implements a gradient descent optimizer with adaptive gain. More... | |
| class | AdvancedBSplineDeformableTransform |
| Deformable transform using a B-spline representation. More... | |
| class | AdvancedBSplineDeformableTransformBase |
| Base class for deformable transform using a B-spline representation. More... | |
| class | AdvancedCombinationTransform |
| This class combines two transforms: an 'initial transform' with a 'current transform'. More... | |
| class | AdvancedEuler3DTransform |
| AdvancedEuler3DTransform of a vector space (e.g. space coordinates) More... | |
| class | AdvancedIdentityTransform |
| Implementation of an Identity Transform. More... | |
| class | AdvancedImageToImageMetric |
| An extension of the ITK ImageToImageMetric. It is the intended base class for all elastix metrics. More... | |
| class | AdvancedKappaStatisticImageToImageMetric |
| Computes similarity between two objects to be registered. More... | |
| class | AdvancedMatrixOffsetTransformBase |
| class | AdvancedMeanSquaresImageToImageMetric |
| Compute Mean square difference between two images, based on AdvancedImageToImageMetric... More... | |
| class | AdvancedNormalizedCorrelationImageToImageMetric |
| Computes normalized correlation between two images, based on AdvancedImageToImageMetric... More... | |
| class | AdvancedRayCastInterpolateImageFunction |
| Projective interpolation of an image at specified positions. More... | |
| class | AdvancedRigid2DTransform |
| AdvancedRigid2DTransform of a vector space (e.g. space coordinates) More... | |
| class | AdvancedRigid3DTransform |
| AdvancedRigid3DTransform of a vector space (e.g. space coordinates) More... | |
| class | AdvancedSimilarity2DTransform |
| AdvancedSimilarity2DTransform of a vector space (e.g. space coordinates) More... | |
| class | AdvancedSimilarity3DTransform |
| AdvancedSimilarity3DTransform of a vector space (e.g. space coordinates) More... | |
| class | AdvancedTransform |
| Transform maps points, vectors and covariant vectors from an input space to an output space. More... | |
| class | AdvancedTranslationTransform |
| Translation transformation of a vector space (e.g. space coordinates) More... | |
| class | AdvancedVersorRigid3DTransform |
| AdvancedVersorRigid3DTransform of a vector space (e.g. space coordinates) More... | |
| class | AdvancedVersorTransform |
| class | AffineDTI3DTransform |
| AffineDTI3DTransform of a vector space (e.g. space coordinates) More... | |
| class | ANNbdTree |
| class | ANNBinaryTreeCreator |
| class | ANNBruteForceTree |
| class | ANNFixedRadiusTreeSearch |
| class | ANNkDTree |
| class | ANNPriorityTreeSearch |
| class | ANNStandardTreeSearch |
| class | BinaryANNTreeBase |
| class | BinaryANNTreeSearchBase |
| class | BinaryTreeBase |
| class | BinaryTreeSearchBase |
| class | BSplineDerivativeKernelFunction2 |
| Derivative of a B-spline kernel used for density estimation and nonparametric regression. More... | |
| class | BSplineInterpolationDerivativeWeightFunction |
| Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
| class | BSplineInterpolationSecondOrderDerivativeWeightFunction |
| Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
| class | BSplineInterpolationWeightFunction2 |
| Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
| class | BSplineInterpolationWeightFunctionBase |
| Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
| class | BSplineKernelFunction2 |
| B-spline kernel used for density estimation and nonparameteric regression. More... | |
| class | BSplineSecondOrderDerivativeKernelFunction2 |
| Derivative of a B-spline kernel used for density estimation and nonparametric regression. More... | |
| class | CenteredTransformInitializer2 |
| CenteredTransformInitializer2 is a helper class intended to initialize the center of rotation and the translation of Transforms having the center of rotation among their parameters. More... | |
| class | CMAEvolutionStrategyOptimizer |
| A Covariance Matrix Adaptation Evolution Strategy Optimizer. More... | |
| class | CombinationImageToImageMetric |
| Combines multiple metrics. More... | |
| class | CorrespondingPointsEuclideanDistancePointMetric |
| Computes the Euclidean distance between a moving point-set and a fixed point-set. Correspondence is needed. More... | |
| class | CyclicBSplineDeformableTransform |
| Deformable transform using a B-spline representation in which the B-spline grid is formulated in a cyclic way. More... | |
| class | CyclicGridScheduleComputer |
| This class computes all information about the B-spline grid. More... | |
| class | DeformationFieldInterpolatingTransform |
| Transform that interpolates a given deformation field. More... | |
| class | DeformationFieldRegulizer |
| This class combines any itk transform with the DeformationFieldTransform. More... | |
| class | DeformationVectorFieldTransform |
| An itk transform based on a DeformationVectorField. More... | |
| class | DisplacementMagnitudePenaltyTerm |
A cost function that calculates  . More... | |
| class | ElasticBodyReciprocalSplineKernelTransform2 |
| class | ElasticBodySplineKernelTransform2 |
| class | ErodeMaskImageFilter |
| class | ExponentialLimiterFunction |
| A soft limiter. More... | |
| class | FiniteDifferenceGradientDescentOptimizer |
| An optimizer based on gradient descent ... More... | |
| class | FullSearchOptimizer |
| An optimizer based on full search. More... | |
| class | GenericConjugateGradientOptimizer |
| A set of conjugate gradient algorithms. More... | |
| class | GetConstNumberOfWeightsHack |
| class | GetConstNumberOfWeightsHack< SplineOrder, 0 > |
| class | GradientDescentOptimizer2 |
| Implement a gradient descent optimizer. More... | |
| class | GradientDifferenceImageToImageMetric |
| Computes similarity between two objects to be registered. More... | |
| class | GridScheduleComputer |
| This class computes all information about the B-spline grid, given the image information and the desired grid spacing. More... | |
| class | HardLimiterFunction |
| A hard limiter. More... | |
| class | ImageFileCastWriter |
| Casts pixel type and writes image data. More... | |
| class | ImageFullSampler |
| Samples all voxels in the InputImageRegion. More... | |
| class | ImageGridSampler |
| Samples image voxels on a regular grid. More... | |
| class | ImageMaskSpatialObject2 |
| Implementation of an image mask as spatial object. More... | |
| class | ImageRandomCoordinateSampler |
| Samples an image by randomly composing a set of physical coordinates. More... | |
| class | ImageRandomSampler |
| Samples randomly some voxels of an image. More... | |
| class | ImageRandomSamplerBase |
| This class is a base class for any image sampler that randomly picks samples. More... | |
| class | ImageRandomSamplerSparseMask |
| Samples randomly some voxels of an image. More... | |
| class | ImageSample |
| A class that defines an image sample, which is the coordinates of a point and its value. More... | |
| class | ImageSamplerBase |
| This class is a base class for any image sampler. More... | |
| class | ImageSpatialObject2 |
| Implementation of an image as spatial object. More... | |
| class | ImageToImageMetricWithFeatures |
| Computes similarity between regions of two images. More... | |
| class | ImageToVectorContainerFilter |
| Base class that takes in an image and pops out a vector container. More... | |
| class | itkCUDAResampleImageFilter |
| Resample an image on the GPU via a coordinate transform. More... | |
| class | KernelTransform2 |
| class | KNNGraphAlphaMutualInformationImageToImageMetric |
| Computes similarity between two images to be registered. More... | |
| class | LimiterFunctionBase |
| Base class for all ITK limiter function objects. More... | |
| class | LineSearchOptimizer |
| A base class for LineSearch optimizers. More... | |
| class | MeshFileReaderBase |
| Base class for mesh readers. More... | |
| class | MeshFileReaderException |
| Base exception class for IO conflicts. More... | |
| class | MevisDicomTiffImageIO |
| class | MevisDicomTiffImageIOFactory |
| Create instances of MevisDicomTiffImageIO objects using an object factory. More... | |
| class | MoreThuenteLineSearchOptimizer |
| ITK version of the MoreThuente line search algorithm. More... | |
| class | MultiInputImageRandomCoordinateSampler |
| Samples an image by randomly composing a set of physical coordinates. More... | |
| class | MultiInputImageToImageMetricBase |
| Implements a metric base class that takes multiple inputs. More... | |
| class | MultiInputMultiResolutionImageRegistrationMethodBase |
| Base class for multi-resolution image registration methods. More... | |
| class | MultiMetricMultiResolutionImageRegistrationMethod |
| Base class for multi-resolution image registration methods. More... | |
| class | MultiOrderBSplineDecompositionImageFilter |
| Calculates the B-Spline coefficients of an image. Spline order may be per dimension from 0 to 5 per. More... | |
| class | MultiResolutionGaussianSmoothingPyramidImageFilter |
| Framework for creating images in a multi-resolution pyramid. More... | |
| class | MultiResolutionImageRegistrationMethod2 |
| Base class for multi-resolution image registration methods. More... | |
| class | MultiResolutionImageRegistrationMethodWithFeatures |
| Class for multi-resolution image registration methods. More... | |
| class | MultiResolutionShrinkPyramidImageFilter |
| Framework for creating images in a multi-resolution pyramid. More... | |
| class | NDImageBase |
| An image whose dimension can be specified at runtime. More... | |
| class | NDImageTemplate |
| This class is a specialization of the NDImageBase, which acts as a wrap around an itk::Image. More... | |
| class | NormalizedGradientCorrelationImageToImageMetric |
| An metric based on the itk::NormalizedGradientCorrelationImageToImageMetric. More... | |
| class | ParabolicErodeDilateImageFilter |
| Parent class for morphological operations with parabolic structuring elements. More... | |
| class | ParabolicErodeImageFilter |
| Class for morphological erosion operations with parabolic structuring elements. More... | |
| class | ParameterFileParser |
| Implements functionality to read a parameter file. More... | |
| class | ParameterMapInterface |
| Implements functionality to get parameters from a parameter map. More... | |
| class | ParzenWindowHistogramImageToImageMetric |
| A base class for image metrics based on a joint histogram computed using Parzen Windowing. More... | |
| class | ParzenWindowMutualInformationImageToImageMetric |
| Computes the mutual information between two images to be registered using the method of Mattes et al. More... | |
| class | ParzenWindowNormalizedMutualInformationImageToImageMetric |
| Computes the normalized mutual information between two images to be registered using a method based on Thevenaz&Unser [3]. More... | |
| class | PatternIntensityImageToImageMetric |
| Computes similarity between two objects to be registered. More... | |
| class | QuasiNewtonLBFGSOptimizer |
| ITK version of the lbfgs algorithm ... More... | |
| class | ReducedDimensionBSplineInterpolateImageFunction |
| Evaluates the B-Spline interpolation of an image. Spline order may be from 0 to 5. More... | |
| class | RSGDEachParameterApartBaseOptimizer |
| An optimizer based on gradient descent... More... | |
| class | RSGDEachParameterApartOptimizer |
| An optimizer based on gradient descent. More... | |
| class | ScaledSingleValuedCostFunction |
| A cost function that applies a scaling to another cost function. More... | |
| class | ScaledSingleValuedNonLinearOptimizer |
| class | SingleValuedPointSetToPointSetMetric |
| Computes similarity between two point sets. More... | |
| class | StackTransform |
| Implements stack of transforms: one for every last dimension index. More... | |
| class | StandardGradientDescentOptimizer |
| This class implements a gradient descent optimizer with a decaying gain. More... | |
| class | ThinPlateR2LogRSplineKernelTransform2 |
| class | ThinPlateSplineKernelTransform2 |
| class | TransformBendingEnergyPenaltyTerm |
| A cost function that calculates the bending energy of a transformation. More... | |
| class | TransformixInputPointFileReader |
| A reader that understands transformix input point files. More... | |
| class | TransformPenaltyTerm |
| A cost function that calculates a penalty term on a transformation. More... | |
| class | TransformRigidityPenaltyTerm |
| A cost function that calculates a rigidity penalty term. More... | |
| class | TransformToDeterminantOfSpatialJacobianSource |
| Generate the spatial Jacobian from a coordinate transform. More... | |
| class | TransformToSpatialJacobianSource |
| Generate the spatial Jacobian matrix from a coordinate transform. More... | |
| class | TranslationTransformInitializer |
| TranslationTransformInitializer is a helper class intended to initialize the translation of a TranslationTransforms. More... | |
| class | UpsampleBSplineParametersFilter |
| Convenience class for upsampling a B-spline coefficient image. More... | |
| class | VarianceOverLastDimensionImageMetric |
| Compute the sum of variances over the slowest varying dimension in the moving image. More... | |
| class | VectorContainerSource |
| A base class for creating an ImageToVectorContainerFilter. More... | |
| class | VectorDataContainer |
| Define a front-end to the STL "vector" container that conforms to the IndexedContainerInterface. More... | |
| class | VectorMeanDiffusionImageFilter |
| Applies an averaging filter to an image. More... | |
| class | VolumeSplineKernelTransform2 |
| class | WeightedCombinationTransform |
| Implements a weighted linear combination of multiple transforms. More... | |
Functions | |
| template<class LineBufferType , class RealType , bool doDilate> | |
| void | DoLine (LineBufferType &LineBuf, LineBufferType &tmpLineBuf, const RealType magnitude, const RealType m_Extreme) |
| template<class TInIter , class TOutIter , class RealType , class OutputPixelType , bool doDilate> | |
| void | doOneDimension (TInIter &inputIterator, TOutIter &outputIterator, ProgressReporter &progress, const long LineLength, const unsigned direction, const int m_MagnitudeSign, const bool m_UseImageSpacing, const RealType m_Extreme, const RealType image_scale, const RealType Sigma) |
This class is a modification of an ITK class. The original copyright message is pasted here, which includes also the version information:
This file is a slightly modified version of an ITK file. Original ITK copyright message:
Parts of the code were taken from an ITK file. Original ITK copyright message, just for reference:
This class is a slight modification of the original ITK class: MultiResolutionImageRegistrationMethod. The original copyright message is pasted here, which includes also the version information:
Includes for the Superclass. Includes for the kNN trees. Supported trees. Supported tree searchers. Include for the spatial derivatives.
Needed for the check of a B-spline transform. Needed for the filtering of the B-spline coefficients. Include stuff needed for the construction of the rigidity coefficient image.
| void itk::DoLine | ( | LineBufferType & | LineBuf, |
| LineBufferType & | tmpLineBuf, | ||
| const RealType | magnitude, | ||
| const RealType | m_Extreme | ||
| ) |
Definition at line 9 of file itkParabolicMorphUtils.h.
| void itk::doOneDimension | ( | TInIter & | inputIterator, |
| TOutIter & | outputIterator, | ||
| ProgressReporter & | progress, | ||
| const long | LineLength, | ||
| const unsigned | direction, | ||
| const int | m_MagnitudeSign, | ||
| const bool | m_UseImageSpacing, | ||
| const RealType | m_Extreme, | ||
| const RealType | image_scale, | ||
| const RealType | Sigma | ||
| ) |
Definition at line 56 of file itkParabolicMorphUtils.h.
Generated on 11-05-2012 for elastix by  1.7.6.1 |
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