org.forester.phylogenyinference
Interface DistanceMatrix

All Known Implementing Classes:

BasicSymmetricalDistanceMatrix

public interface DistanceMatrix

Nested Class Summary

static class

DistanceMatrix.Format

Method Summary

String	getIdentifier(int i)
int	getIndex(String identifier)
int	getSize()
double	getValue(int col, int row)
void	setIdentifier(int i, String identifier)
void	setValue(int col, int row, double distance)
StringBuffer	toStringBuffer(DistanceMatrix.Format format)

Method Detail

getIdentifier

String getIdentifier(int i)

getIndex

int getIndex(String identifier)

getSize

int getSize()

getValue

double getValue(int col,
                int row)

setIdentifier

void setIdentifier(int i,
                   String identifier)

setValue

void setValue(int col,
              int row,
              double distance)

toStringBuffer

StringBuffer toStringBuffer(DistanceMatrix.Format format)