Package org.biojava.bio.structure.scop

Parsers and API for SCOP, Structural Classification of Proteins.

See:
Description

Interface Summary

ScopDatabase

General API how to interact with SCOP

Class Summary

BerkeleyScopInstallation
CachedRemoteScopInstallation	An extension of the RemoteScopInstallation that caches some of the data locally.
RemoteScopInstallation	A class that fetches information about SCOP from a remote data-source.
ScopDescription	Contains data from dir.des.scop.txt_1.75
ScopDomain	Container for the information for a domain.
ScopFactory	Controls the global ScopDatabase being used.
ScopInstallation	This class provides access to the SCOP protein structure classification.
ScopNode

Enum Summary

ScopCategory

The various categories provided by SCOP.

Package org.biojava.bio.structure.scop Description

Parsers and API for SCOP, Structural Classification of Proteins. See DemoSCOP.java for an example.