org.biojava.bio.seq.db
Class IDMaker.ByName

java.lang.Object
  org.biojava.bio.seq.db.IDMaker.ByName

All Implemented Interfaces:

java.io.Serializable, IDMaker

Enclosing interface:

IDMaker

public static class IDMaker.ByName
extends java.lang.Object
implements java.io.Serializable, IDMaker

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojava.bio.seq.db.IDMaker

IDMaker.ByName, IDMaker.ByURN

Field Summary

Fields inherited from interface org.biojava.bio.seq.db.IDMaker

byName, byURN

Constructor Summary

IDMaker.ByName()

Method Summary

java.lang.String

calcID(Sequence seq) Calculate the id for a sequence.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

IDMaker.ByName

public IDMaker.ByName()

Method Detail

calcID

public java.lang.String calcID(Sequence seq)

Description copied from interface: IDMaker

Calculate the id for a sequence.

Each unique sequence should return a unique ID.

Specified by:

calcID in interface IDMaker

Parameters:

seq - the sequence to ID

Returns:

the id for the sequence