Model Processors

Classes
class	BALL::VIEW::AtomBondModelBaseProcessor
class	BALL::VIEW::AddBackboneModel
struct	BALL::VIEW::AddBackboneModel::ModelPart
class	BALL::VIEW::AddBallAndStickModel
class	BALL::VIEW::AddCartoonModel
class	BALL::VIEW::ColorProcessor
class	BALL::VIEW::InterpolateColorProcessor
class	BALL::VIEW::FieldLineCreator
class	BALL::VIEW::ForceModel
class	BALL::VIEW::HBondModelProcessor
class	BALL::VIEW::LabelModel
class	BALL::VIEW::AddLineModel
class	BALL::VIEW::ModelProcessor
class	BALL::VIEW::ElementColorProcessor
class	BALL::VIEW::ResidueNumberColorProcessor
class	BALL::VIEW::ResidueNameColorProcessor
class	BALL::VIEW::AtomChargeColorProcessor
class	BALL::VIEW::AtomDistanceColorProcessor
class	BALL::VIEW::CustomColorProcessor
class	BALL::VIEW::TemperatureFactorColorProcessor
class	BALL::VIEW::OccupancyColorProcessor
class	BALL::VIEW::ForceColorProcessor
class	BALL::VIEW::SecondaryStructureColorProcessor
class	BALL::VIEW::ResidueTypeColorProcessor
class	BALL::VIEW::AddSurfaceModel
class	BALL::VIEW::AddVanDerWaalsModel

Enumerations
enum	BALL::VIEW::AddBackboneModel::ModelTypes { BALL::VIEW::AddBackboneModel::TUBE, BALL::VIEW::AddBackboneModel::RIBBON, BALL::VIEW::AddBackboneModel::NUCLEIC_ACID }
enum	BALL::VIEW::AddCartoonModel::Types { BALL::VIEW::AddCartoonModel::STRAND = NUCLEIC_ACID + 1, BALL::VIEW::AddCartoonModel::HELIX }
enum	BALL::VIEW::InterpolateColorProcessor::Mode { BALL::VIEW::InterpolateColorProcessor::USE_OUTSIDE_COLOR = 0, BALL::VIEW::InterpolateColorProcessor::DEFAULT_COLOR_FOR_OUTSIDE_COLORS, BALL::VIEW::InterpolateColorProcessor::NO_OUTSIDE_COLORS }
enum	BALL::VIEW::LabelModel::Mode { BALL::VIEW::LabelModel::ALL_ITEMS, BALL::VIEW::LabelModel::ALL_ATOMS, BALL::VIEW::LabelModel::ALL_RESIDUES, BALL::VIEW::LabelModel::ONE_LABEL }

Detailed Description

Molecular Models

There are several model types to visualise molecular structures in VIEW:

• Line
• Stick / BallandStick
• Surfaces
• Backbone
• Cartoon
• VanDerWaals
• ...

Every model is implemeted in a class derived from ModelProcessor, which operates on Kernel objects (Atoms , Bonds , ...).

If you want to add a new model, you have to do four things:

• Create a new derived ModelProcessor class
• Add a new entry in the enum VIEW::ModelType (see VIEW/KERNEL/common.h)
• Insert the name for the new model in getModelName() (see VIEW/KERNEL/common.h)
• Modify BALL::VIEW::DisplayProperties::createRepresentation_()
  In general ModelProcessor 's are members in Representations .

The new model will be automaticaly added to the DisplayProperties dialog.

Coloring Methods

There are also several methods to colorize the molecular models and every method is implemented in a class derived from ColorProcessor . Every instance of Representation can have a pointer to an object of ColorProcessor , which it calls to get the color for the GeometricObjects .

Enumeration Type Documentation

enum BALL::VIEW::LabelModel::Mode

Enumerator
ALL_ITEMS
ALL_ATOMS
ALL_RESIDUES
ONE_LABEL

Definition at line 43 of file labelModel.h.

enum BALL::VIEW::InterpolateColorProcessor::Mode

Enumerator
USE_OUTSIDE_COLOR
DEFAULT_COLOR_FOR_OUTSIDE_COLORS
NO_OUTSIDE_COLORS

Definition at line 212 of file colorProcessor.h.

enum BALL::VIEW::AddBackboneModel::ModelTypes

protected

Enumerator
TUBE
RIBBON
NUCLEIC_ACID

Definition at line 64 of file backboneModel.h.

enum BALL::VIEW::AddCartoonModel::Types

Enumerator
STRAND
HELIX

Definition at line 33 of file cartoonModel.h.