BALL::GAFFTypeProcessor Member List
This is the complete list of members for
BALL::GAFFTypeProcessor, including all inherited members.
| AB enum value | BALL::GAFFTypeProcessor | |
| annotateAliphaticAndAromaticRingAtoms_() | BALL::GAFFTypeProcessor | [protected] |
| annotateBondTypes_() | BALL::GAFFTypeProcessor | [protected] |
| annotatePlanarRingAtoms_() | BALL::GAFFTypeProcessor | [protected] |
| annotateRingSizes_() | BALL::GAFFTypeProcessor | [protected] |
| argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| argument_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| assignAtomtype_(Atom &atom) | BALL::GAFFTypeProcessor | [protected] |
| atom_types_ | BALL::GAFFTypeProcessor | [protected] |
| BOND_TYPES enum name | BALL::GAFFTypeProcessor | |
| ces_parsers_ | BALL::GAFFTypeProcessor | [protected] |
| const_argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| const_argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| current_molecule_ | BALL::GAFFTypeProcessor | [protected] |
| DB enum value | BALL::GAFFTypeProcessor | |
| db enum value | BALL::GAFFTypeProcessor | |
| DL enum value | BALL::GAFFTypeProcessor | |
| finish() | BALL::UnaryProcessor< Composite > | [inline, virtual] |
| GAFFTypeProcessor() | BALL::GAFFTypeProcessor | |
| GAFFTypeProcessor(const Options &new_options) | BALL::GAFFTypeProcessor | |
| getCarbonTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
| getHydrogenTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
| getNitrogenTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
| getOxygenTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
| getSulfurTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
| operator()(Composite &composite) | BALL::GAFFTypeProcessor | [virtual] |
| options | BALL::GAFFTypeProcessor | |
| parseAtomtypeTableFile_() | BALL::GAFFTypeProcessor | [protected] |
| planarAtom_(const Atom &atom) | BALL::GAFFTypeProcessor | [protected] |
| postProcessAtomTypes_(Molecule *molecule) | BALL::GAFFTypeProcessor | [protected] |
| precomputeAtomProperties_(Molecule *molecule) | BALL::GAFFTypeProcessor | [protected] |
| precomputeBondProperties_(Molecule *molecule) | BALL::GAFFTypeProcessor | [protected] |
| result_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| SB enum value | BALL::GAFFTypeProcessor | |
| sb enum value | BALL::GAFFTypeProcessor | |
| sssr_ | BALL::GAFFTypeProcessor | [protected] |
| start() | BALL::UnaryProcessor< Composite > | [inline, virtual] |
| TB enum value | BALL::GAFFTypeProcessor | |
| UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline] |
| UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | [inline] |
| ~GAFFTypeProcessor() | BALL::GAFFTypeProcessor | [virtual] |
| ~UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline, virtual] |