Class TestCasesApplyMnp

Method Details

• test_apply_variant_01

  @Test public void test_apply_variant_01()

  Variant before exon

• test_apply_variant_02

  @Test public void test_apply_variant_02()

  Variant right before exon start

• test_apply_variant_03

  @Test public void test_apply_variant_03()

  Variant overlapping exon start

• test_apply_variant_04

  @Test public void test_apply_variant_04()

  Variant at exon start

• test_apply_variant_05

  @Test public void test_apply_variant_05()

  Variant in exon

• test_apply_variant_06

  @Test public void test_apply_variant_06()

  Variant right before exon end

• test_apply_variant_07

  @Test public void test_apply_variant_07()

  Variant overlapping exon end

• test_apply_variant_08

  @Test public void test_apply_variant_08()

  Variant right after exon end

• test_apply_variant_09

  @Test public void test_apply_variant_09()

  Variant after exon end

• test_apply_variant_10

  @Test public void test_apply_variant_10()

  Variant over exon: variant is larger than exon, starts before exon and overlaps the whole exon

• test_apply_variant_11

  @Test public void test_apply_variant_11()

  Variant over exon: variant is larger than exon and starts right at exons start and ends after exon end

• test_apply_variant_12

  @Test public void test_apply_variant_12()

  Variant over exon: variant is larger than exon, starts before exon start and end right at exon end

• test_apply_variant_13

  @Test public void test_apply_variant_13()

  Variant over exon: variant is on the same coordiantes as exon