Package org.snpeff.snpEffect.testCases.unity

Class TestCasesApplyMixed

java.lang.Object
org.snpeff.snpEffect.testCases.unity.TestCasesBase
org.snpeff.snpEffect.testCases.unity.TestCasesBaseApply
org.snpeff.snpEffect.testCases.unity.TestCasesApplyMixed
public class TestCasesApplyMixed extends TestCasesBaseApply
Test cases: apply a variant (MIXED) to a transcript

  • Constructor Details

    • TestCasesApplyMixed

      public TestCasesApplyMixed()

  • Method Details

    • test_apply_variant_01_longer

      @Test public void test_apply_variant_01_longer()
      Variant before exon

    • test_apply_variant_01_shorter

      @Test public void test_apply_variant_01_shorter()
      Variant before exon

    • test_apply_variant_02_longer

      @Test public void test_apply_variant_02_longer()
      Variant before exon

    • test_apply_variant_02_shorter

      @Test public void test_apply_variant_02_shorter()
      Variant before exon

    • test_apply_variant_03_longer

      @Test public void test_apply_variant_03_longer()
      Variant overlapping exon start

    • test_apply_variant_03_shorter

      @Test public void test_apply_variant_03_shorter()
      Variant overlapping exon start

    • test_apply_variant_04_longer

      @Test public void test_apply_variant_04_longer()
      Variant at exon start

    • test_apply_variant_04_shorter

      @Test public void test_apply_variant_04_shorter()
      Variant at exon start

    • test_apply_variant_05_longer

      @Test public void test_apply_variant_05_longer()
      Variant in exon

    • test_apply_variant_05_shorter

      @Test public void test_apply_variant_05_shorter()
      Variant in exon

    • test_apply_variant_06_longer

      @Test public void test_apply_variant_06_longer()
      Variant in exon

    • test_apply_variant_06_shorter

      @Test public void test_apply_variant_06_shorter()
      Variant in exon

    • test_apply_variant_07_longer

      @Test public void test_apply_variant_07_longer()
      Variant overlapping exon end

    • test_apply_variant_07_shorter

      @Test public void test_apply_variant_07_shorter()
      Variant overlapping exon end

    • test_apply_variant_08_longer

      @Test public void test_apply_variant_08_longer()
      Variant right after exon end

    • test_apply_variant_08_shorter

      @Test public void test_apply_variant_08_shorter()
      Variant right after exon end

    • test_apply_variant_09_longer

      @Test public void test_apply_variant_09_longer()
      Variant after exon end

    • test_apply_variant_09_shorter

      @Test public void test_apply_variant_09_shorter()
      Variant after exon end