Class WriteConvertedIterableRandomAccessibleInterval<A,B,S extends RandomAccessible<A> & IterableInterval<A>>
- All Implemented Interfaces:
Iterable<B>,Dimensions,EuclideanSpace,Interval,IterableInterval<B>,IterableRealInterval<B>,RandomAccessible<B>,RandomAccessibleInterval<B>,RealInterval,View
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Field Summary
Fields inherited from class net.imglib2.AbstractWrappedRealInterval
sourceInterval -
Constructor Summary
ConstructorsConstructorDescriptionWriteConvertedIterableRandomAccessibleInterval(S source, SamplerConverter<? super A, B> converter) -
Method Summary
Modifier and TypeMethodDescriptioncursor()Returns aRealCursorthat iterates with optimal speed without calculating the location at each iteration step.Returns aRealLocalizableIteratorthat calculates its location at each iteration step.Create a random access sampler for integer coordinates.randomAccess(Interval interval) Create a random access sampler for integer coordinates.Methods inherited from class net.imglib2.converter.AbstractConvertedIterableRandomAccessibleInterval
firstElement, iterationOrder, iterator, sizeMethods inherited from class net.imglib2.AbstractWrappedInterval
dimension, dimensions, max, max, max, min, min, minMethods inherited from class net.imglib2.AbstractWrappedRealInterval
getSource, numDimensions, realMax, realMax, realMax, realMin, realMin, realMinMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, waitMethods inherited from interface net.imglib2.Dimensions
dimension, dimensionsMethods inherited from interface net.imglib2.EuclideanSpace
numDimensionsMethods inherited from interface java.lang.Iterable
forEach, spliterator
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Constructor Details
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WriteConvertedIterableRandomAccessibleInterval
public WriteConvertedIterableRandomAccessibleInterval(S source, SamplerConverter<? super A, B> converter)
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Method Details
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randomAccess
Description copied from interface:RandomAccessibleCreate a random access sampler for integer coordinates.The returned random access covers as much of the domain as possible.
Please note:RandomAccessibleIntervals have a finite domain (theirInterval), soRandomAccessible.randomAccess()is only guaranteed to cover this finite domain. This may lead to unexpected results when usingViews. In the following codeRandomAccessible<T> extended = Views.extendBorder( img ) RandomAccessibleInterval<T> cropped = Views.interval( extended, img ); RandomAccess<T> a1 = extended.randomAccess(); RandomAccess<T> a2 = cropped.randomAccess();
Theaccessa1on the extended image is valid everywhere. However, somewhat counter-intuitively, theaccessa2on the extended and cropped image is only valid on the intervalimgto which the extended image was cropped. The access is only required to cover this interval, because it is the domain of the cropped image.Viewsattempts to provide the fastest possible access that meets this requirement, and will therefore strip the extension. To deal with this, if you know that you need to access pixels outside the domain of theRandomAccessibleInterval, and you know that theRandomAccessibleIntervalis actually defined beyond its interval boundaries, then use theRandomAccessible.randomAccess(Interval)variant and specify which interval you actually want to access. In the above example,RandomAccess<T> a2 = cropped.randomAccess( Intervals.expand( img, 10 ) );
will provide the extended access as expected.- Specified by:
randomAccessin interfaceRandomAccessible<A>- Specified by:
randomAccessin classAbstractConvertedIterableRandomAccessibleInterval<A,B, S extends RandomAccessible<A> & IterableInterval<A>> - Returns:
- random access sampler
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randomAccess
Description copied from interface:RandomAccessibleCreate a random access sampler for integer coordinates.The returned random access is intended to be used in the specified interval only. Thus, the RandomAccessible may provide optimized versions. If the interval is completely contained in the domain, the random access is guaranteed to provide the same values as that obtained by
RandomAccessible.randomAccess()within the interval.- Specified by:
randomAccessin interfaceRandomAccessible<A>- Specified by:
randomAccessin classAbstractConvertedIterableRandomAccessibleInterval<A,B, S extends RandomAccessible<A> & IterableInterval<A>> - Parameters:
interval- in which interval you intend to use the random access.- Returns:
- random access sampler
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cursor
Description copied from interface:IterableRealIntervalReturns a
RealCursorthat iterates with optimal speed without calculating the location at each iteration step. Localization is performed on demand.Use this where localization is required rarely/ not for each iteration.
- Specified by:
cursorin interfaceIterableInterval<A>- Specified by:
cursorin interfaceIterableRealInterval<A>- Specified by:
cursorin classAbstractConvertedIterableRandomAccessibleInterval<A,B, S extends RandomAccessible<A> & IterableInterval<A>> - Returns:
- fast iterating iterator
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localizingCursor
Description copied from interface:IterableRealIntervalReturns a
RealLocalizableIteratorthat calculates its location at each iteration step. That is, localization is performed with optimal speed.Use this where localization is required often/ for each iteration.
- Specified by:
localizingCursorin interfaceIterableInterval<A>- Specified by:
localizingCursorin interfaceIterableRealInterval<A>- Specified by:
localizingCursorin classAbstractConvertedIterableRandomAccessibleInterval<A,B, S extends RandomAccessible<A> & IterableInterval<A>> - Returns:
- fast localizing iterator
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