Uses of Interface
net.imglib2.RealLocalizable
Packages that use RealLocalizable
Package
Description
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Uses of RealLocalizable in net.imglib2
Classes in net.imglib2 with type parameters of type RealLocalizableModifier and TypeClassDescriptionstatic final classKDTree.DimComparator<L extends RealLocalizable>Compare RealLocalizables by comparing their coordinates in dimension d.Subinterfaces of RealLocalizable in net.imglib2Modifier and TypeInterfaceDescriptioninterfaceCursor<T>A Cursor iterates over a set of Localizable elements, for example the image values at the (integer) pixel positions of an image.interfaceTheLocalizableinterface can localize itself in an n-dimensional discrete space.interfaceRandomAccess<T>interfaceRealCursor<T>A RealCursor iterates over a set of RealLocalizable elements, for example intensity values sampled at a finite set of arbitrary real positions.interfaceClasses in net.imglib2 that implement RealLocalizableModifier and TypeClassDescriptionclassAbstract implementation ofCursor.classAbstract implementation ofCursor.classAn abstract class that implements theLocalizableinterface using a long[] array to maintain position.classAn abstract class that implements theLocalizableinterface using an int[] array to maintain position.classAbstract base class for localizingCursors.classAbstract base class for localizingCursors.classAn abstract class that implements theRealLocalizableinterface using an array of doubles to maintain positionfinal classprotected static final classA KDTreeNode that stores it's value as a Sampler.protected static final classA KDTreeNode that stores it's value as a reference.classKDTreeNode<T>Abstract base class for nodes in a KDTree.classA Point is a position in Euclidean space specified in integer coordinates.classclassA point is a location in EuclideanSpace.classMethods in net.imglib2 with type parameters of type RealLocalizableModifier and TypeMethodDescriptionprotected <L extends RealLocalizable>
KDTree.ValueNode<T> protected <L extends RealLocalizable>
KDTree.ValueNode<T> Construct the tree by recursively adding nodes.protected <L extends RealLocalizable>
KDTree.ValueNode<T> KDTree.makeNode(ListIterator<L> first, ListIterator<L> last, int d) protected <L extends RealLocalizable>
KDTree.ValueNode<T> KDTree.makeNode(ListIterator<L> first, ListIterator<L> last, int d, List<T> values, int[] permutation) Construct the tree by recursively adding nodes.protected static <L extends RealLocalizable>
booleanKDTree.verifyDimensions(List<L> positions, int n) Check whether all positions in the positions list have dimension n.Methods in net.imglib2 with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoidRealPoint.move(RealLocalizable localizable) voidRealPositionable.move(RealLocalizable distance) Move the element relative to its current location using aRealLocalizableas distance vector.voidRealPoint.setPosition(RealLocalizable localizable) voidRealPositionable.setPosition(RealLocalizable position) Place the element at the same location as a givenRealLocalizablefinal doubleKDTreeNode.squDistanceTo(RealLocalizable p) Compute the squared distance from p to this node.Constructors in net.imglib2 with parameters of type RealLocalizableModifierConstructorDescriptionKDTreeNode(RealLocalizable position, int dimension, KDTreeNode<T> left, KDTreeNode<T> right) RealPoint(RealLocalizable localizable) Create a point using the position and dimensionality of aRealLocalizableSamplerNode(Sampler<T> sampler, RealLocalizable position, int dimension, KDTree.SamplerNode<T> left, KDTree.SamplerNode<T> right) ValueNode(T value, RealLocalizable position, int dimension, KDTree.ValueNode<T> left, KDTree.ValueNode<T> right) -
Uses of RealLocalizable in net.imglib2.converter
Classes in net.imglib2.converter that implement RealLocalizableModifier and TypeClassDescriptionclassTODOclassTODOclassTODOMethods in net.imglib2.converter with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoidAbstractConvertedRealRandomAccess.move(RealLocalizable localizable) voidAbstractConvertedRealRandomAccess.setPosition(RealLocalizable localizable) -
Uses of RealLocalizable in net.imglib2.converter.read
Classes in net.imglib2.converter.read that implement RealLocalizableModifier and TypeClassDescriptionclassConvertedCursor<A,B extends Type<B>> TODOfinal classConvertedRandomAccess<A,B extends Type<B>> TODOfinal classConvertedRealRandomAccess<A,B extends Type<B>> TODO -
Uses of RealLocalizable in net.imglib2.converter.readwrite
Classes in net.imglib2.converter.readwrite that implement RealLocalizable -
Uses of RealLocalizable in net.imglib2.display.projector
Classes in net.imglib2.display.projector that implement RealLocalizableModifier and TypeClassDescriptionclassBase class for 2D projectors.classA general 2D Projector that uses two dimensions as input to create the 2D result.classA general 2D Projector that uses two dimensions as input to create the 2D result. -
Uses of RealLocalizable in net.imglib2.display.projector.composite
Classes in net.imglib2.display.projector.composite that implement RealLocalizableModifier and TypeClassDescriptionclassCreates a composite image from across multiple dimensional positions along an axis (typically, but not necessarily, channels).classCreates a composite image from across multiple dimensional positions along an axis (typically, but not necessarily, channels). -
Uses of RealLocalizable in net.imglib2.display.projector.sampler
Classes in net.imglib2.display.projector.sampler that implement RealLocalizableModifier and TypeClassDescriptionclassSamplingProjector2D<A,B> A general 2D Projector that uses three dimensions as input to create the 2D result. -
Uses of RealLocalizable in net.imglib2.display.projector.specialized
Classes in net.imglib2.display.projector.specialized that implement RealLocalizableModifier and TypeClassDescriptionclassArrayImgXYByteProjector<A extends GenericByteType<A>>Fast implementation of aAbstractProjector2Dthat selects a 2D data plain from an ByteType ArrayImg.classArrayImgXYShortProjector<A extends GenericShortType<A>>Fast implementation of aAbstractProjector2Dthat selects a 2D data plain from an ShortType ArrayImg.classPlanarImgXYByteProjector<A extends GenericByteType<A>>Fast implementation of aAbstractProjector2Dthat selects a 2D data plain from a ByteType PlanarImg.classPlanarImgXYShortProjector<A extends GenericShortType<A>>Fast implementation of aAbstractProjector2Dthat selects a 2D data plain from an ShortType PlanarImg. -
Uses of RealLocalizable in net.imglib2.display.projector.volatiles
Classes in net.imglib2.display.projector.volatiles that implement RealLocalizableModifier and TypeClassDescriptionclassVolatile2DRandomAccessibleProjector<T,A extends Volatile<T>, B> IterableIntervalProjector2DforVolatileinput. -
Uses of RealLocalizable in net.imglib2.img.array
Classes in net.imglib2.img.array that implement RealLocalizableModifier and TypeClassDescriptionclassAbstractArrayCursor<T extends NativeType<T>>classAbstractArrayLocalizingCursor<T extends NativeType<T>>final classArrayCursor<T extends NativeType<T>>final classArrayLocalizingCursor<T extends NativeType<T>>final classArrayLocalizingSubIntervalCursor<T extends NativeType<T>>LocalizingAbstractArrayLocalizingCursoron anArrayImg.classArrayRandomAccess<T extends NativeType<T>>RandomAccesson anArrayImg.final classArraySubIntervalCursor<T extends NativeType<T>> -
Uses of RealLocalizable in net.imglib2.img.cell
Classes in net.imglib2.img.cell that implement RealLocalizableModifier and TypeClassDescriptionclassCellCursor<T extends NativeType<T>,C extends Cell<?>> Cursoron aAbstractCellImg.classCellLocalizingCursor<T extends NativeType<T>,C extends Cell<?>> LocalizingCursoron aAbstractCellImg.classCellRandomAccess<T extends NativeType<T>,C extends Cell<?>> RandomAccesson aAbstractCellImg. -
Uses of RealLocalizable in net.imglib2.img.list
Classes in net.imglib2.img.list that implement RealLocalizableModifier and TypeClassDescriptionclassclassclassfinal classListCursor<T>final classclassRandomAccesson aListImg. -
Uses of RealLocalizable in net.imglib2.img.planar
Classes in net.imglib2.img.planar that implement RealLocalizableModifier and TypeClassDescriptionclassPlanarCursor<T extends NativeType<T>>Basic Iterator forPlanarContainersclassPlanarCursor1D<T extends NativeType<T>>Basic Iterator for 1dPlanarContainersclassPlanarCursor2D<T extends NativeType<T>>Basic Iterator for 2dPlanarContainersclassPlanarLocalizingCursor<T extends NativeType<T>>Localizing Iterator for aPlanarContainersclassPlanarLocalizingCursor1D<T extends NativeType<T>>TODOclassPlanarLocalizingCursor2D<T extends NativeType<T>>TODOclassPlanarPlaneSubsetCursor<T extends NativeType<T>>Basic Iterator forPlanarContainersclassPlanarPlaneSubsetLocalizingCursor<T extends NativeType<T>>Cursor optimized for one plane in an PlanarImg.classPlanarRandomAccess<T extends NativeType<T>>RandomAccesson aPlanarImg.classPlanarRandomAccess1D<T extends NativeType<T>>RandomAccessfor a 1-dimensionalPlanarImg. -
Uses of RealLocalizable in net.imglib2.img.sparse
Classes in net.imglib2.img.sparse that implement RealLocalizableModifier and TypeClassDescriptionfinal classNtreeCursor<T extends NativeType<T>>final classNtreeRandomAccess<T extends NativeType<T>> -
Uses of RealLocalizable in net.imglib2.interpolation.neighborsearch
Classes in net.imglib2.interpolation.neighborsearch that implement RealLocalizableModifier and TypeClassDescriptionclassInverseDistanceWeightingInterpolator<T extends RealType<T>>RealRandomAccessto aKNearestNeighborSearchwhose sample value is generated by weighting the k nearest neighbors of a query real coordinate by their inverse distance to an arbitrary power p.classNearest-neighbor interpolation implemented byNearestNeighborSearch. -
Uses of RealLocalizable in net.imglib2.interpolation.randomaccess
Classes in net.imglib2.interpolation.randomaccess that implement RealLocalizableModifier and TypeClassDescriptionclassRealRandomAccessto aRandomAccessby nearest floor interpolation (i.e., the value is sampled at floor(x)).classLanczosInterpolator<T extends RealType<T>>n-dimensional double-based Lanczos InterpolationclassRealRandomAccessto aRandomAccessby nearest neighbor interpolation.classNLinearInterpolator<T extends NumericType<T>>Performs multi-linear interpolation.classNLinearInterpolator1D<T extends NumericType<T>>classNLinearInterpolator2D<T extends NumericType<T>>classNLinearInterpolator3D<T extends NumericType<T>>classN-linear interpolator for ARGB values with overflow check. -
Uses of RealLocalizable in net.imglib2.iterator
Classes in net.imglib2.iterator that implement RealLocalizableModifier and TypeClassDescriptionclassUse this class to iterate a virtualIntervalin flat order, that is: row by row, plane by plane, cube by cube, ...classUse this class to iterate a virtualIntervalin flat order, that is: row by row, plane by plane, cube by cube, ...classUse this class to iterate a virtual rectangularIntervalwhose min coordinates are at 0n in flat order, that is: row by row, plane by plane, cube by cube, ...classAIntervalIteratorthat has an adjustable offsetclassALocalizingIntervalIteratorthat has an adjustable offsetclassUse this class to iterate a virtual rectangularIntervalwhose min coordinates are at 0n in flat order, that is: row by row, plane by plane, cube by cube, ... -
Uses of RealLocalizable in net.imglib2.neighborsearch
Methods in net.imglib2.neighborsearch that return RealLocalizableModifier and TypeMethodDescriptionKNearestNeighborSearch.getPosition(int i) Access the position of the ith nearest neighbor, ordered by square Euclidean distance.KNearestNeighborSearchOnIterableRealInterval.getPosition()KNearestNeighborSearchOnIterableRealInterval.getPosition(int i) KNearestNeighborSearchOnKDTree.getPosition()KNearestNeighborSearchOnKDTree.getPosition(int i) NearestNeighborSearch.getPosition()Access the position of the nearest neighbor, ordered by square Euclidean distance.NearestNeighborSearchOnIterableRealInterval.getPosition()NearestNeighborSearchOnKDTree.getPosition()RadiusNeighborSearch.getPosition(int i) Access the position of the ith neighbor within radius.RadiusNeighborSearchOnKDTree.getPosition(int i) Methods in net.imglib2.neighborsearch with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoidKNearestNeighborSearch.search(RealLocalizable reference) Perform k-nearest-neighbor search for a reference coordinate.voidKNearestNeighborSearchOnIterableRealInterval.search(RealLocalizable reference) voidKNearestNeighborSearchOnKDTree.search(RealLocalizable reference) voidNearestNeighborSearch.search(RealLocalizable reference) Perform nearest-neighbor search for a reference coordinate.voidNearestNeighborSearchOnIterableRealInterval.search(RealLocalizable reference) voidNearestNeighborSearchOnKDTree.search(RealLocalizable p) voidRadiusNeighborSearch.search(RealLocalizable reference, double radius, boolean sortResults) Perform neighbor search within a radius about a reference coordinate.voidRadiusNeighborSearchOnKDTree.search(RealLocalizable reference, double radius, boolean sortResults) protected final doubleKNearestNeighborSearchOnIterableRealInterval.squareDistance(RealLocalizable query) Calculate the square Euclidean distance of a query location to the location stored in referenceLocation.protected final doubleNearestNeighborSearchOnIterableRealInterval.squareDistance(RealLocalizable query) Calculate the square Euclidean distance of a query location to the location stored in referenceLocation. -
Uses of RealLocalizable in net.imglib2.outofbounds
Subinterfaces of RealLocalizable in net.imglib2.outofboundsClasses in net.imglib2.outofbounds that implement RealLocalizableModifier and TypeClassDescriptionclassAbstract implementation of shared functions for mirroring out of bounds.classAbstractOutOfBoundsValue<T extends Type<T>>classRepeat the boundary pixels.classOutOfBoundsConstantValue<T extends Type<T>>final classCoordinates out of image bounds are mirrored between boundary coordinates.classOutOfBoundsMirrorExpWindowing<T extends NumericType<T>>Adds a exponential windowing to the mirrored content outside the Interval boundariesclassCoordinates out of image bounds are mirrored at boundary coordinates.classCoordinates out of image bounds are periodically repeated.classOutOfBoundsRandomValue<T extends RealType<T>>Return a random value in a certain range when outside of the Intervalfinal classMethods in net.imglib2.outofbounds with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoidRealOutOfBoundsRealRandomAccess.move(RealLocalizable localizable) voidRealOutOfBoundsRealRandomAccess.setPosition(RealLocalizable localizable) -
Uses of RealLocalizable in net.imglib2.position.transform
Classes in net.imglib2.position.transform that implement RealLocalizableModifier and TypeClassDescriptionclassAbstractPositionableTransform<LocalizablePositionable extends Localizable & Positionable>ARealPositionablethat drives aPositionableto somehow derived discrete coordinates.classFloor<LocalizablePositionable extends Localizable & Positionable>ARealPositionablethat drives aPositionableto its floor discrete coordinates.classFloorOffset<LocalizablePositionable extends Localizable & Positionable>ARealPositionablethat drives aPositionableto its floor discrete coordinates plus a discrete offset vector.classRound<LocalizablePositionable extends Localizable & Positionable>ARealPositionablethat drives aPositionableto its round discrete coordinates:f = r < 0 ? (long)( r - 0.5 ) : (long)( r + 0.5 )Methods in net.imglib2.position.transform with parameters of type RealLocalizableModifier and TypeMethodDescriptionprotected voidFloorOffset.f(RealLocalizable r, long[] f) static final voidFloor.floor(RealLocalizable r, long[] f) voidFloor.move(RealLocalizable localizable) voidFloorOffset.move(RealLocalizable localizable) voidRound.move(RealLocalizable localizable) static final voidRound.round(RealLocalizable r, long[] f) voidFloor.setPosition(RealLocalizable localizable) voidFloorOffset.setPosition(RealLocalizable localizable) voidRound.setPosition(RealLocalizable localizable) Constructors in net.imglib2.position.transform with parameters of type RealLocalizableModifierConstructorDescriptionFloor(RealLocalizable origin, LocalizablePositionable target) FloorOffset(RealLocalizable origin, LocalizablePositionable target, long[] offset) FloorOffset(RealLocalizable origin, LocalizablePositionable target, Localizable offset) Round(RealLocalizable origin, LocalizablePositionable target) -
Uses of RealLocalizable in net.imglib2.util
Methods in net.imglib2.util with parameters of type RealLocalizableModifier and TypeMethodDescriptionstatic booleanIntervals.contains(RealInterval containing, RealLocalizable contained) Test whether thecontaininginterval contains thecontainedpoint.static final doubleUtil.distance(RealLocalizable position1, RealLocalizable position2) static StringUtil.printCoordinates(RealLocalizable localizable) -
Uses of RealLocalizable in net.imglib2.view
Classes in net.imglib2.view that implement RealLocalizableModifier and TypeClassDescriptionfinal classclassclassclassfinal classfinal classACursorthat iterates anyRandomAccessibleIntervalby moving aRandomAccessin flat iteration order.protected final classclassclassstatic final classARandomAccesson aStackView.static classARandomAccesson aStackView.classfinal classfinal classTODO -
Uses of RealLocalizable in net.imglib2.view.composite
Classes in net.imglib2.view.composite that implement RealLocalizable -
Uses of RealLocalizable in net.imglib2.view.iteration
Classes in net.imglib2.view.iteration that implement RealLocalizableModifier and TypeClassDescriptionclassWrap a cursor that runs on a hyperslice and apply coordinate transform on localize calls.