Field Detail

• jmol

  private JmolPanel jmol

• display

  private DisplayPanel display

• vwr

  private Viewer vwr

• jSpecViewFrame

  private jspecview.application.MainFrame jSpecViewFrame

• jSpecViewForceNew

  private boolean jSpecViewForceNew

• modificationMode

  private int modificationMode

• lastSimulate

  private java.lang.String lastSimulate

• propertiesFileName

  private static java.lang.String propertiesFileName

Constructor Detail

• StatusListener

  StatusListener​(JmolPanel jmol,
                 DisplayPanel display)

Method Detail

• setViewer

  void setViewer​(Viewer vwr)

• notifyEnabled

  public boolean notifyEnabled​(CBK type)

  Specified by:

  notifyEnabled in interface JmolCallbackListener

• notifyCallback

  public void notifyCallback​(CBK type,
                             java.lang.Object[] data)

  Specified by:

  notifyCallback in interface JmolCallbackListener

• playAudio

  private void playAudio​(java.lang.String fileName)

  WAV only for application

  Parameters:

  fileName -

• notifyStructureModified

  private void notifyStructureModified​(int atomIndex,
                                       int modelIndex,
                                       int mode)

  Parameters:

  atomIndex -

  modelIndex -

  mode -

• setCallbackFunction

  public void setCallbackFunction​(java.lang.String callbackType,
                                  java.lang.String callbackFunction)

  Specified by:

  setCallbackFunction in interface JmolCallbackListener

• eval

  public java.lang.String eval​(java.lang.String strEval)

  Specified by:

  eval in interface JmolStatusListener

• createImage

  public java.lang.String createImage​(java.lang.String fileName,
                                      java.lang.String type,
                                      java.lang.Object text_or_bytes,
                                      int quality)

  Description copied from interface: JmolStatusListener
  Starting with Jmol 11.8.RC5, for a context where the Jmol application is embedded in another application simply to send the returned message to the application. In this way any application can have access to the WRITE command.

  Specified by:

  createImage in interface JmolStatusListener

  Parameters:

  fileName -

  type -

  text_or_bytes -

  quality -

  Returns:

  null ("you do it" or canceled) or a message starting with OK or an error message

• notifyAtomPicked

  private void notifyAtomPicked​(java.lang.String info)

• notifyFileLoaded

  private void notifyFileLoaded​(java.lang.String fullPathName,
                                java.lang.String fileName,
                                java.lang.String modelName,
                                java.lang.String errorMsg,
                                java.lang.Boolean isAsync)

• sendConsoleMessage

  private void sendConsoleMessage​(java.lang.String strStatus)

• showUrl

  public void showUrl​(java.lang.String url)

  Specified by:

  showUrl in interface JmolStatusListener

• functionXY

  public float[][] functionXY​(java.lang.String functionName,
                              int nX,
                              int nY)

  this is just a test method for isosurface FUNCTIONXY

  Specified by:

  functionXY in interface JmolStatusListener

  Parameters:

  functionName -

  nX -

  nY -

  Returns:

  f(x,y) as a 2D array

• functionXYZ

  public float[][][] functionXYZ​(java.lang.String functionName,
                                 int nX,
                                 int nY,
                                 int nZ)

  Description copied from interface: JmolStatusListener
  for isosurface FUNCTIONXYZ

  Specified by:

  functionXYZ in interface JmolStatusListener

  Returns:

  3D array or null

• getRegistryInfo

  public java.util.Map<java.lang.String,​java.lang.Object> getRegistryInfo()

  Specified by:

  getRegistryInfo in interface JmolStatusListener

• resizeInnerPanel

  public int[] resizeInnerPanel​(java.lang.String data)

  Specified by:

  resizeInnerPanel in interface JmolStatusListener

• checkJSpecView

  private void checkJSpecView​(boolean closeAll)

• setJSpecView

  public void setJSpecView​(java.lang.String peaks,
                           boolean doLoadCheck,
                           boolean isFileLoad)

• register

  public void register​(java.lang.String id,
                       JmolSyncInterface jsi)

  Specified by:

  register in interface JmolSyncInterface

• syncScript

  public void syncScript​(java.lang.String script)

  Specified by:

  syncScript in interface JmolSyncInterface

• setProperties

  public void setProperties​(java.util.Properties properties)

  Specified by:

  setProperties in interface JSVInterface

• saveProperties

  public void saveProperties​(java.util.Properties properties)

  Specified by:

  saveProperties in interface JSVInterface

• exitJSpecView

  public void exitJSpecView​(boolean withDialog,
                            java.lang.Object frame)

  Specified by:

  exitJSpecView in interface JSVInterface

  Parameters:

  withDialog -

  frame -

• runScript

  public void runScript​(java.lang.String script)

  no queuing here -- called by MainFrame

  Specified by:

  runScript in interface JSVInterface

  Parameters:

  script -

• syncToJmol

  public void syncToJmol​(java.lang.String msg)

  Specified by:

  syncToJmol in interface JSVInterface

  Parameters:

  msg -

• getJSpecViewProperty

  public java.util.Map<java.lang.String,​java.lang.Object> getJSpecViewProperty​(java.lang.String type)

  Specified by:

  getJSpecViewProperty in interface JmolStatusListener

  Specified by:

  getJSpecViewProperty in interface JmolSyncInterface