java.lang.Object
- java.io.InputStream
- - htsjdk.samtools.seekablestream.SeekableStream
  - - htsjdk.samtools.seekablestream.SeekablePathStream

All Implemented Interfaces:

Closeable, AutoCloseable
```
public class SeekablePathStream
extends SeekableStream
```
An implementation of SeekableStream for Path.

Field Summary
- Fields inherited from class htsjdk.samtools.seekablestream.SeekableStream
  mark

Constructor Summary

Constructors
Constructor	Description
`SeekablePathStream(Path path)`
`SeekablePathStream(Path path, Function<SeekableByteChannel,SeekableByteChannel> wrapper)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`close()`
`static void`	`closeAllInstances()`
`boolean`	`eof()`
`String`	`getSource()`
`long`	`length()`
`long`	`position()`
`int`	`read()`
`int`	`read(byte[] buffer, int offset, int length)`
`void`	`seek(long position)`	Seeks the stream to the provided position.
`long`	`skip(long n)`

Methods inherited from class htsjdk.samtools.seekablestream.SeekableStream
available, mark, markSupported, readFully, reset

Methods inherited from class java.io.InputStream
nullInputStream, read, readAllBytes, readNBytes, readNBytes, transferTo

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - SeekablePathStream
```
public SeekablePathStream(Path path)
                   throws IOException
```
    Throws:
    
    IOException
  - SeekablePathStream
```
public SeekablePathStream(Path path,
                          Function<SeekableByteChannel,SeekableByteChannel> wrapper)
                   throws IOException
```
    Throws:
    
    IOException
- Method Detail
  - length
```
public long length()
```
    Specified by:
    
    length in class SeekableStream
    
    Returns:
    
    the length of the stream; 0 if not available or empty.
  - eof
```
public boolean eof()
            throws IOException
```
    Specified by:
    
    eof in class SeekableStream
    
    Returns:
    
    true if the stream is already consumed; false otherwise.
    
    Throws:
    
    IOException
  - seek
```
public void seek(long position)
          throws IOException
```
    Description copied from class: SeekableStream
    
    Seeks the stream to the provided position.
    
    Specified by:
    
    seek in class SeekableStream
    
    Throws:
    
    IOException
  - position
```
public long position()
              throws IOException
```
    Specified by:
    
    position in class SeekableStream
    
    Returns:
    
    the current byte position of the stream.
    
    Throws:
    
    IOException
  - skip
```
public long skip(long n)
          throws IOException
```
    Overrides:
    
    skip in class InputStream
    
    Throws:
    
    IOException
  - read
```
public int read(byte[] buffer,
                int offset,
                int length)
         throws IOException
```
    Specified by:
    
    read in class SeekableStream
    
    Throws:
    
    IOException
  - read
```
public int read()
         throws IOException
```
    Specified by:
    
    read in class InputStream
    
    Throws:
    
    IOException
  - getSource
```
public String getSource()
```
    Specified by:
    
    getSource in class SeekableStream
    
    Returns:
    
    String representation of source (e.g. URL, file path, etc.), or null if not available.
  - close
```
public void close()
           throws IOException
```
    Specified by:
    
    close in interface AutoCloseable
    
    Specified by:
    
    close in interface Closeable
    
    Specified by:
    
    close in class SeekableStream
    
    Throws:
    
    IOException
  - closeAllInstances
```
public static void closeAllInstances()
```

Class SeekablePathStream

Field Summary

Fields inherited from class htsjdk.samtools.seekablestream.SeekableStream

Constructor Summary

Method Summary

Methods inherited from class htsjdk.samtools.seekablestream.SeekableStream

Methods inherited from class java.io.InputStream

Methods inherited from class java.lang.Object

Constructor Detail

SeekablePathStream

SeekablePathStream

Method Detail

length

eof

seek

position

skip

read

read

getSource

close

closeAllInstances