RANSExternalCompressor (htsjdk 2.23.0 API)

java.lang.Object
- htsjdk.samtools.cram.compression.ExternalCompressor
- - htsjdk.samtools.cram.compression.RANSExternalCompressor

public final class RANSExternalCompressor
extends ExternalCompressor

Field Summary
- Fields inherited from class htsjdk.samtools.cram.compression.ExternalCompressor
  NO_COMPRESSION_ARG

Constructor Summary

Constructors
Constructor	Description
`RANSExternalCompressor(int order, RANS rans)`
`RANSExternalCompressor(RANS rans)`	We use a shared RANS instance for all compressors.
`RANSExternalCompressor(RANS.ORDER order, RANS rans)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`byte[]`	`compress(byte[] data)`
`boolean`	`equals(Object o)`
`RANS.ORDER`	`getOrder()`
`int`	`hashCode()`
`String`	`toString()`
`byte[]`	`uncompress(byte[] data)`

Methods inherited from class htsjdk.samtools.cram.compression.ExternalCompressor
getCompressorForMethod, getMethod

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

RANSExternalCompressor
```
public RANSExternalCompressor(RANS rans)
```
We use a shared RANS instance for all compressors.

Parameters:

rans -

RANSExternalCompressor

public RANSExternalCompressor(int order,
                              RANS rans)

RANSExternalCompressor

public RANSExternalCompressor(RANS.ORDER order,
                              RANS rans)

Method Detail
- compress
```
public byte[] compress(byte[] data)
```
  Specified by:
  
  compress in class ExternalCompressor
- uncompress
```
public byte[] uncompress(byte[] data)
```
  Specified by:
  
  uncompress in class ExternalCompressor
- getOrder
```
public RANS.ORDER getOrder()
```
- toString
```
public String toString()
```
  Overrides:
  
  toString in class ExternalCompressor
- equals
```
public boolean equals(Object o)
```
  Overrides:
  
  equals in class ExternalCompressor
- hashCode
```
public int hashCode()
```
  Overrides:
  
  hashCode in class ExternalCompressor