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cctools
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Public Member Functions | |
| __init__ (self, func, *args, **kwargs) | |
| Creates a new python task. | |
| submit_finalize (self) | |
| Finalizes the task definition once the manager that will execute is run. | |
| enable_temp_output (self) | |
| Marks the output of this task to stay at the worker. | |
| set_output_cache (self, cache=False) | |
| Set the cache behavior for the output of the task. | |
| output_file (self) | |
| Returns the ndcctools.taskvine.file.File object that represents the output of this task. | |
| output (self) | |
| returns the result of a python task as a python variable | |
| disable_output_serialization (self) | |
| Disables serialization of results to disk when writing to a file for transmission. | |
Public Member Functions inherited from ndcctools.taskvine.task.Task | |
| addref (self) | |
| Return a copy of this task. | |
| set_command (self, command) | |
| Set the command to be executed by the task. | |
| set_library_required (self, library) | |
| Set the name of the library at the worker that should execute the task's command. | |
| get_library_required (self) | |
| Get the name of the library at the worker that should execute the task's command. | |
| needs_library (self, library) | |
| Deprecated, see set_library_required. | |
| set_library_provided (self, library_name) | |
| Set the library name provided by this task. | |
| get_libray_provided (self) | |
| Get the name of the library at the worker that should execute the task's command. | |
| provides_library (self, library) | |
| Deprecated, see set_library_provided. | |
| set_function_slots (self, nslots) | |
| Set the number of concurrent functions a library can run. | |
| set_function_exec_mode_from_string (self, exec_mode) | |
| Set the execution mode of functions in a library. | |
| set_scheduler (self, scheduler) | |
| Set the worker selection scheduler for task. | |
| set_tag (self, tag) | |
| Attach a user defined logical name to the task. | |
| set_category (self, name) | |
| Label the task with the given category. | |
| add_feature (self, name) | |
| Label the task with the given user-defined feature. | |
| add_input (self, file, remote_name, strict_input=False, mount_symlink=False) | |
| Add any input object to a task. | |
| add_output (self, file, remote_name, watch=False, failure_only=None, success_only=None) | |
| Add any output object to a task. | |
| set_snapshot_file (self, filename) | |
| When monitoring, indicates a json-encoded file that instructs the monitor to take a snapshot of the task resources. | |
| add_starch_package (self, file) | |
| Add a Starch package as an execution context. | |
| add_poncho_package (self, file) | |
| Add a Poncho package as an execution context. | |
| add_execution_context (self, f) | |
| Adds an execution context to the task. | |
| set_retries (self, max_retries) | |
| Indicate the number of times the task should be retried. | |
| set_max_forsaken (self, max_forsaken) | |
| Indicate the number of times the task can be returned to the manager without being executed. | |
| set_cores (self, cores) | |
| Indicate the number of cores required by this task. | |
| set_memory (self, memory) | |
| Indicate the memory (in MB) required by this task. | |
| set_disk (self, disk) | |
| Indicate the disk space (in MB) required by this task. | |
| set_gpus (self, gpus) | |
| Indicate the number of GPUs required by this task. | |
| set_priority (self, priority) | |
| Indicate the the priority of this task (larger means better priority, default is 0). | |
| set_env_var (self, name, value=None) | |
| Set this environment variable before running the task. | |
| set_monitor_output (self, directory) | |
| Set a name for the resource summary output directory from the monitor. | |
| tag (self) | |
| Get the user-defined logical name for the task. | |
| category (self) | |
| Get the category name for the task. | |
| command (self) | |
| Get the shell command executed by the task. | |
| state (self) | |
| Get the state of the task. | |
| std_output (self) | |
| Get the standard output of the task. | |
| id (self) | |
| Get the task id number. | |
| exit_code (self) | |
| Get the exit code of the command executed by the task. | |
| result (self) | |
| Return a string that explains the result of a task. | |
| completed (self) | |
| Return True if task executed and its command terminated normally. | |
| successful (self) | |
| Return True if task executed successfully, (i.e. | |
| get_metric (self, name) | |
| Return various integer performance metrics about a completed task. | |
| addrport (self) | |
| Get the address and port of the host on which the task ran. | |
| hostname (self) | |
| Get the address and port of the host on which the task ran. | |
| resources_measured (self) | |
| Get the resources measured for the task execution if resource monitoring is enabled. | |
| limits_exceeded (self) | |
| Get the resources the task exceeded. | |
| resources_requested (self) | |
| Get the resources the task requested to run. | |
| resources_allocated (self) | |
| Get the resources allocated to the task in its latest attempt. | |
| add_nopen (self, manager) | |
| Adds inputs for nopen library and rules file and sets LD_PRELOAD. | |
Additional Inherited Members | |
Protected Member Functions inherited from ndcctools.taskvine.task.Task | |
| _compute_library_name (self, library) | |
| Compute the name of a given library. | |
| ndcctools.taskvine.task.PythonTask.__init__ | ( | self, | |
| func, | |||
| * | args, | ||
| ** | kwargs | ||
| ) |
Creates a new python task.
| self | Reference to the current python task object |
| func | python function to be executed by task |
| args | arguments used in function to be executed by task |
| kwargs | keyword arguments used in function to be executed by task |
Reimplemented from ndcctools.taskvine.task.Task.
Reimplemented in ndcctools.taskvine.task.FunctionCall, ndcctools.taskvine.dask_executor.PythonTaskDask, ndcctools.taskvine.dask_executor.FunctionCallDask, ndcctools.taskvine.futures.FuturePythonTask, and ndcctools.taskvine.futures.FutureFunctionCall.
| ndcctools.taskvine.task.PythonTask.submit_finalize | ( | self | ) |
Finalizes the task definition once the manager that will execute is run.
This function is run by the manager before registering the task for execution.
| self | Reference to the current python task object |
| manager | Manager to which the task was submitted |
Reimplemented from ndcctools.taskvine.task.Task.
Reimplemented in ndcctools.taskvine.futures.FutureFunctionCall, ndcctools.taskvine.futures.FuturePythonTask, and ndcctools.taskvine.task.FunctionCall.
| ndcctools.taskvine.task.PythonTask.enable_temp_output | ( | self | ) |
Marks the output of this task to stay at the worker.
Functions that consume the output of this tasks have to add self.output_file as an input, and cloudpickle.load() it.
E.g.:
where fn_with_tmp may look something like this:
| self | Reference to the current python task object |
| ndcctools.taskvine.task.PythonTask.set_output_cache | ( | self, | |
cache = False |
|||
| ) |
Set the cache behavior for the output of the task.
| cache | If True or 'workflow', cache the file at workers for reuse until the end of the workflow. If 'always', the file is cache until the end-of-life of the worker. Default is False (file is not cache). |
| ndcctools.taskvine.task.PythonTask.output_file | ( | self | ) |
Returns the ndcctools.taskvine.file.File object that represents the output of this task.
| ndcctools.taskvine.task.PythonTask.output | ( | self | ) |
returns the result of a python task as a python variable
| self | reference to the current python task object |
Reimplemented from ndcctools.taskvine.task.Task.
Reimplemented in ndcctools.taskvine.task.FunctionCall, ndcctools.taskvine.futures.FutureFunctionCall, and ndcctools.taskvine.futures.FuturePythonTask.
| ndcctools.taskvine.task.PythonTask.disable_output_serialization | ( | self | ) |
Disables serialization of results to disk when writing to a file for transmission.
WARNING: Only do this if the function itself encodes the output in a way amenable for serialization.
| self | Reference to the current python task object |